Nitrincola iocasae: F5I99_17185
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Entry
F5I99_17185 CDS
T06212
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nik
Nitrincola iocasae
Pathway
nik00300
Lysine biosynthesis
nik00470
D-Amino acid metabolism
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01230
Biosynthesis of amino acids
Module
nik_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F5I99_17185 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F5I99_17185 (dapF)
Enzymes [BR:
nik01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
F5I99_17185 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
HTH_Tnp_ISL3
DUF6933
Motif
Other DBs
NCBI-ProteinID:
QEW08088
UniProt:
A0A5J6LHW5
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Position
complement(3730328..3731158)
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AA seq
276 aa
AA seq
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MLVRFSKMHGLGNDFMVIDAVAQRVRLNTDTVKRLADRHTGVGFDQLLLVEPPTRPDMDF
RYRIYNADGSEVEHCGNGARCFARFVRERRLSVKNEIRVETAKGSALLTLLPDRQVEVNM
GEPVLQPVEIPFAAEQEAAIYRLEIEGQCYEVSAVSMGNPHCVLLVNDVAQAPVKQLGRL
IERHARFPQRVNVGFMQVMSRSQIQLRVFERGAGETQACGTGACAAVVAGRLRGLLDEQV
DVHLTGGKLQISWEGKGSPVLMTGPATTVYEGQVYL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgctggtaagattcagtaaaatgcatggtctggggaatgactttatggtgattgatgcc
gtggcacagcgtgtccgtctcaataccgataccgtcaagcgcctggcagaccggcataca
ggtgtgggctttgaccagttgctattggttgaaccgccgacacgtccggatatggatttt
cgttaccgtatctacaatgccgacggttcagaggtggaacactgtggtaatggtgctcgc
tgttttgcccgttttgtgcgtgaacgccgcttgagcgtcaaaaatgagatacgtgttgaa
accgctaaaggcagtgcgttgttaacgctgttgccagaccgtcaggttgaagtgaatatg
ggtgagccagttttgcagccggtcgagatcccttttgcggcggagcaggaagccgctatc
tatcgattggaaattgaagggcagtgttatgaggtttcggcggtctctatggggaatccg
cactgtgtgttgctggttaatgatgtagcgcaggcaccggtgaagcaactggggcgtttg
attgagcgccatgcgcgtttcccgcaacgggtcaatgtcggttttatgcaggtaatgtcg
cgctctcagatccagctgcgtgtatttgaacggggtgcgggtgaaacccaggcctgtgga
accggtgcctgcgcggctgtcgtagctggacggcttcgtggtttgctggatgagcaggtc
gatgtgcatctgactggtggcaagctgcagatcagttgggaaggaaagggctccccggtt
ttgatgaccgggccggccacaacggtatatgaagggcaggtttacttatga
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