Nitrincola iocasae: F5I99_17190
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Entry
F5I99_17190 CDS
T06212
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
nik
Nitrincola iocasae
Pathway
nik00300
Lysine biosynthesis
nik00470
D-Amino acid metabolism
nik01100
Metabolic pathways
nik01110
Biosynthesis of secondary metabolites
nik01120
Microbial metabolism in diverse environments
nik01230
Biosynthesis of amino acids
Module
nik_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
F5I99_17190 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
F5I99_17190 (lysA)
Enzymes [BR:
nik01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
F5I99_17190 (lysA)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QEW08089
UniProt:
A0A5J6LHK8
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Position
complement(3731171..3732427)
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AA seq
418 aa
AA seq
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MESFEYRNGRLFCEEMALDTLAATHGTPAYVYSRDAIERAYLAYANALQGRGALICYAVK
ANSNIALLNLLARLGAGFDIVSIGELERVLRAGGDPAKVVFSGVGKQADEIRRALDVGIF
CFNIESDAELDRVNAVALEAGKVARVSFRVNPDVDAGTHPYISTGLKENKFGIDIDQAIV
VYRRAAALPGVDVVGMDCHIGSQLTEISPFLDALERLLQLVDRLQTEGIHISHLDLGGGL
GVCYTDETPPAPDAFIAAMLERLGDRPLQLIFEPGRSIVANAGVLLTRVEFLKQTGEKNF
AIIDAAMNDLIRPALYSAYQEIIPLSLRDEGESRHWDLVGPICETGDFLGKDRELNLQAG
DLLAVCSAGAYGFVMASNYNSRPRPVELMVDDNQVFVIREREKISDLMQGEQLLPGDC
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaaagttttgaataccgtaatggtcgattgttctgtgaagagatggctctggatact
ctggctgccacccacgggacgcctgcttatgtatactcccgtgacgccatagaacgtgct
tacctggcgtatgccaatgcattgcaggggcgaggtgcgctgatttgttatgcggttaag
gccaactccaatattgctttactgaatctgctggctcgcctgggtgcgggttttgatatt
gtctctatcggtgaactagagcgggtgttgcgagcgggtggtgatccggccaaggtggtt
ttttccggcgttggcaagcaggctgatgaaatacgtcgggcactggatgtgggtattttc
tgtttcaacattgaatctgatgctgagctggatcgtgtcaatgccgtggctctggaggcg
ggcaaggtggcgcgggtttcattccgtgtcaatccagatgttgatgcgggaacccatcct
tatatatccacaggacttaaagaaaataaatttggtatcgatattgatcaggctatcgtc
gtgtatcgacgcgccgctgctttaccgggagttgacgtagtaggcatggattgccatatt
ggcagtcagttgaccgaaatcagcccatttctggatgcactggaacgtttgttacaattg
gtcgatcggttgcagactgagggtattcacatttctcatctggatctcggtggaggcctg
ggtgtttgctataccgatgagacgccaccggctccggatgcctttattgcggctatgttg
gaacgcttaggcgatcggccgttacagctgatttttgaaccaggccgctcgattgttgcg
aatgccggtgtattgctgacccgggttgagtttctcaagcagacaggtgagaagaacttt
gccattattgatgcggcgatgaatgacctgatccgtcccgccctctacagcgcctatcag
gaaattattccgcttagcctgcgtgatgagggagaatccagacattgggatttagttggc
cctatctgtgaaaccggcgactttttgggtaaagaccgggaattgaatttgcaagctggt
gatctgctggcggtctgttcagccggggcttatggttttgttatggcgtccaattacaac
agtcgtccgcgtccggttgaattgatggttgatgataatcaggtctttgtcattcgtgaa
cgggaaaaaatcagtgatctgatgcagggcgaacagctactgcccggcgattgctga
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