Nitrincola iocasae: F5I99_17255
Help
Entry
F5I99_17255 CDS
T06212
Name
(GenBank) O-antigen ligase family protein
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
nik
Nitrincola iocasae
Pathway
nik00540
Lipopolysaccharide biosynthesis
nik01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
F5I99_17255
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
nik01005
]
F5I99_17255
Enzymes [BR:
nik01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
F5I99_17255
Lipopolysaccharide biosynthesis proteins [BR:
nik01005
]
Core region
F5I99_17255
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Wzy_C
Motif
Other DBs
NCBI-ProteinID:
QEW08099
UniProt:
A0A5J6LHL9
LinkDB
All DBs
Position
complement(3745451..3746695)
Genome browser
AA seq
414 aa
AA seq
DB search
MKSQTLPMDFRGVGFYLIVASLSFSVFFAVDKAYKILPIVYFIAAFFYVIKEKPFIDYKA
ILFYFCAVFFVVLGDLLNIYFGNSDFSGIEQVARNVVLILPLIFILECERLTTKIIVGSV
FFMLCVTAFASVFQYFGMYAQDSSHLSGGRVGLWWNSVPFANSIVLFLGLILGSVLVSPK
SYWMNIIVVLACTLMLVVVYLSGTRSALLSYFFVIFIYLFMTVKSDKRIWFRSLIGVFLL
VLVAAASYLFGDRVELAVEQLYSHFHKGAEFTSVSIRLSSWYYSWLIFLDNPLFGHGTEG
AIHVGKDIVEAGLVPEYVVDYHSHSDVFDALKRNGLLGFLGLLWVYISPFLLMWYFKLSA
RDVAPVFLVVIALFVSGLTEVNIRHNISSNSFYMAYMLAIAVVFKYKVQRGQSL
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgaagtcgcagactttacccatggatttcagaggggttggtttttatttgatagtagct
tcgctgtctttttcagttttttttgctgttgataaagcttataaaattctaccgatagta
tattttattgctgcatttttttacgtaataaaagaaaaaccctttatagactacaaagct
attttattttatttttgtgctgttttttttgttgtgctaggtgatttacttaatatttat
tttggtaattctgattttagtgggattgaacaggttgccaggaatgttgtgcttattctt
ccactaatttttattttagagtgtgaaaggctaactacaaaaatcatagttggttctgtg
ttttttatgttatgcgttacagcttttgcttctgtttttcaatattttggaatgtatgca
caagactcatcgcatctttcaggcgggcgtgttgggttgtggtggaattcagtgcctttc
gccaattcaattgtactttttcttggtcttattttaggttctgttttggtaagtccaaaa
agctattggatgaatattattgttgtgcttgcctgcactctaatgcttgttgttgtgtat
cttagcggtacgcgtagtgctcttctttcgtatttttttgtaatctttatatatctgttt
atgacagtaaagagtgataaacgcatttggtttagatctttaataggtgtttttcttttg
gttttggtagccgctgcgtcctatctatttggtgatagagttgagctcgcagtagaacaa
ctttatagccactttcacaagggagctgagttcacctctgtgagtatcagattgagtagc
tggtattattcctggcttatatttcttgacaatcccttgtttggacatggaacagaagga
gctattcatgttgggaaagatatagttgaagctggactggtgcccgaatatgtagtggat
taccattcacactctgatgtttttgatgcgctcaaacgtaacggtctgttgggttttttg
ggtctgttatgggtttatatttcaccatttcttttgatgtggtatttcaagctttcagca
agagatgttgctccagtttttctggttgttatagctctttttgtaagtggattaactgag
gttaatataagacataatatttcatctaattccttctatatggcttatatgcttgctata
gctgttgtatttaaatacaaggttcaaagaggccagtcgttatga
DBGET
integrated database retrieval system
