Nitrincola iocasae: F5I99_17550
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Entry
F5I99_17550 CDS
T06212
Name
(GenBank) extracellular solute-binding protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
nik
Nitrincola iocasae
Pathway
nik02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
F5I99_17550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nik02000
]
F5I99_17550
Transporters [BR:
nik02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
F5I99_17550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
Motif
Other DBs
NCBI-ProteinID:
QEW08152
UniProt:
A0A5J6LIM9
LinkDB
All DBs
Position
3811272..3812306
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AA seq
344 aa
AA seq
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MKAFTQKAAVSAATLLLSSSLYAAGELKLYNWSDYMPQELIDKFSSSYDVTVIQDSYDSN
ETLLARLKSGVTGYDVAVPGDYMVAIMIEEGLLDKVQPHTLENFKHIKEELVDVYFDPGR
EYSIPYQFGTTSFMVDTNAYSGDIDTLAILFDTPDELKGKVNMFRDVNDVINAALRYKGF
ETCNSNRAELAEVNDLLLEAKSDWLSITSDGAREMVVSGDAAVSMIWNGMGLRGRLEKPS
LQYAYPKEGMTAWADNLVVLKGAENRDNALLFMNFLLEPENAAALTNFAGYTAGVNNTAP
FLMDELKNAPELNPPADAPTAEFVPPCSPDVVALYDRIWTNLLK
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcctttacccaaaaagcagccgtatcagcggcaacactactactgtcatcctcc
ctctatgccgcaggtgaactgaagttatataactggtcagactatatgccgcaggagctg
attgataagttcagcagcagctatgatgtgaccgttattcaggactcctacgacagcaat
gaaacactgctggcacgcctgaaatccggcgttaccggctatgatgtcgccgtacccggt
gactatatggtcgccatcatgattgaagagggtctgctggataaagtccaaccccatacc
ttagaaaacttcaaacacatcaaagaagaactggttgacgtctactttgatccaggccgt
gagtactctatcccgtatcaattcggcaccacctcttttatggtcgacaccaacgcctat
tcgggggatatagatactctggcgatactgtttgacacccctgatgagctaaagggtaag
gtcaacatgttccgtgacgtcaatgacgttatcaatgccgcgcttcgctataaaggcttt
gaaacctgcaacagcaacagagctgaactggccgaggtcaatgacctgttactggaagca
aaaagtgactggctgagcatcacctcagatggcgctcgtgaaatggtggtttccggcgat
gccgccgtcagtatgatctggaatggtatggggttgcgcggccgtcttgagaagccatca
ctgcagtacgcttatcctaaagaaggcatgactgcctgggctgacaacctggttgtcctg
aaaggcgctgagaaccgtgataacgcactgctgttcatgaatttcctgctggaaccggaa
aacgccgccgcgctgaccaattttgcgggctataccgctggggtaaataacaccgcgccc
ttcctgatggatgaactgaagaatgcaccggaactcaacccaccagccgatgcaccgaca
gctgagttcgttcccccctgctcacccgacgttgtcgctctttatgatcgcatctggacc
aatctactgaagtaa
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