Nitrincola iocasae: F5I99_18500
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Entry
F5I99_18500 CDS
T06212
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
nik
Nitrincola iocasae
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nik03000
]
F5I99_18500
Transcription factors [BR:
nik03000
]
Prokaryotic type
Helix-turn-helix
LysR family
F5I99_18500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Motif
Other DBs
NCBI-ProteinID:
QEW08321
UniProt:
A0A5J6LJY5
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Position
complement(4007606..4008532)
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AA seq
308 aa
AA seq
DB search
MKTLKPALSGQIADADIRLLRIFRNVVERGGFAAAEADLNISRAAISTAMADLEQRLSLR
LCQRGRSGFSLTEEGREVYAYSLQLLSALEDFRTQVNSLHAHLKGELNIGITDNLVTMPK
MYITDAIGAIKARGPEVMINIRMTPPAEIEVAVLDGRLHLGVVPVIKALPGLNYLPLYSE
TSQLYCSHSNALFGKEAVTDAELSHMDVVAAAYAQTEEALKHYQSLYVSATATDREGIAF
LILTGRYLGFLPTHYAERWVKEGRMQAIAPSQRQFTTDFAAITRKGKRPNLILETYLELL
QNTIQAKD
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgaagacattgaaacccgccttatctggacagatcgccgacgccgatatccgcttgtta
cggatttttcgtaacgtcgttgagcgcggtggttttgcggctgcagaagccgacctgaac
atcagtcgggccgccatcagtaccgccatggccgatctggagcagcgcctgtcattacgc
ttgtgccagcgtggtcgcagtggcttttcgctgaccgaggagggccgggaggtgtatgcc
tacagtctgcaactgttgtcggcattggaggattttcgcacccaggtcaacagcctgcat
gcacacttaaaaggggagttgaatatcggtatcaccgataacctggtgaccatgccgaaa
atgtacatcaccgatgctatcggtgctatcaaggctcgcggccccgaggtgatgatcaat
attcgtatgacgccacccgccgaaattgaggttgcagtgctggatggccgtttgcatctg
ggcgtagtgcccgttatcaaggccttgccagggctgaattatctaccgctttacagcgaa
acatcacaactctattgcagtcattcgaatgcgctattcggtaaagaggctgtcacggac
gctgagctcagtcacatggatgtggttgccgctgcctacgcacaaacagaagaagcgctg
aagcattaccagtcactctatgtcagcgccaccgccacagatagggaagggatagctttt
ctgattctcactggccgttatctgggctttctacccacccattatgccgagcgttgggtc
aaggaaggacggatgcaggccatcgcacccagccaacgccagttcaccacagattttgct
gcgattactcgcaagggcaagcgccccaacctgattctggaaacctatttggagttgttg
caaaacaccatccaggcaaaggattga
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