KEGG   Nitrincola iocasae: F5I99_19050
Entry
F5I99_19050       CDS       T06212                                 
Name
(GenBank) HAMP domain-containing protein
  KO
K03406  methyl-accepting chemotaxis protein
Organism
nik  Nitrincola iocasae
Pathway
nik02020  Two-component system
nik02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:nik00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    F5I99_19050
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    F5I99_19050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:nik02035]
    F5I99_19050
Bacterial motility proteins [BR:nik02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    F5I99_19050
SSDB
Motif
Pfam: MCPsignal 4HB_MCP_1 HAMP TarH DUF948 GCS2 GCIP_C CENP-H
Other DBs
NCBI-ProteinID: QEW08413
UniProt: A0A5J6LJ39
LinkDB
Position
4108157..4109776
AA seq 539 aa
MFKNMKIGTRLGLGFGLVLLLLSVIAFVGITRLSAVQDNFDVVVNENNVKIKAISNMRDS
LNISARSVRNMIILDNTEDKNSEYQRILEARKNYEEYSNTLVSLLVTDNARTFMTEIEAA
GTNTNTLFDMVIELTMAGREDEAREILLIKVRDAQSGWFSALDTMLQINERYNAELEQSA
RQNYKIAFTLMLTLAIAAALFSIGIAFWVTRSITRPIGSAVSVAEKLAEGDLTVEIDVDS
KDETGQLLAAMQRMVGKLSQIIGEVRSSGDALSSASEEVSATAQSMSQASSEQAASVEET
SASVEQMGASINQNTDSAKVTEGIASKAAQEANEGGEAVKETVMAMNTIADKISIIDDIA
YQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVAKSSVGLAEKAG
KLLEEIVPGINRTSDLVQEITAASQEQSVGANQINTAMDQLNQITQQNASSSEELAATAE
EMSGQAEQLQQLMAFFKVDEGGSEKSHTSVRKSKNAMGYSAVKSSSKLTGKSEDEFVSF
NT seq 1620 nt   +upstreamnt  +downstreamnt
atgttcaaaaatatgaaaatcggtacgcgcctgggcctggggtttggcctagtgctgctg
ttgctgtcggttattgcttttgttggtatcacccgattgtcggcggtacaagataacttt
gatgtggtcgttaatgaaaacaatgtcaagataaaagctattagtaatatgcgcgacagc
ttaaacatcagcgcgcgctcagtgcgcaacatgattatattagataataccgaggataag
aactcggagtaccaacgcatccttgaggcgcgcaagaactatgaagagtacagcaacacg
ctcgtcagtcttcttgttactgataatgccagaacgttcatgacagaaatagaagcagca
ggtacaaataccaatacgttgtttgatatggtcattgaactgactatggcaggtcgggaa
gatgaggccagagagattctcttaatcaaggttagggacgcgcagagtgggtggttctcg
gcgctggacactatgctccaaattaatgagcggtataacgcggagctcgaacaatccgcg
cggcagaattataagattgcctttaccttgatgctgacgttggctatcgcagcagcacta
ttctctatcggcattgctttctgggtcactcgcagcattacaaggcctattggttctgct
gttagcgtagccgaaaaactagctgagggtgacctgacggtagaaattgatgtggattcc
aaggatgagaccggccagttgctggctgcaatgcagcggatggtgggtaagttgtcgcag
attatcggcgaagtccgtagctcaggtgatgctttgtcatcagcctcagaagaagtcagt
gcaacggcgcagagtatgtcacaggcatccagcgaacaggccgcttcggtagaagaaacc
tctgcttcagtggagcagatgggggcttcgatcaatcagaacactgatagcgccaaggtc
actgaaggtattgcatctaaagccgcgcaggaagcgaatgagggtggtgaagcagttaaa
gaaacagtgatggcaatgaatactattgccgacaagatcagcatcatcgatgacatcgct
taccaaaccaacctgttggccttgaacgcggccattgaagcggcgcgtgccggagagcat
ggcaaaggctttgcggtggttgcggcggaagtgcgcaagttggctgagcgcagccaagtg
gccgcgcaggaaattggcgaagtagcgaagagctcagtgggcctagctgaaaaggcaggt
aaactgctggaagagattgtaccgggtatcaaccgcacttctgacctggtgcaggaaatt
actgcagcatcgcaggagcagtccgtcggtgcgaatcagattaataccgcaatggaccag
ttgaaccagatcacccagcagaatgccagctcatcggaagaactggcggcgacagccgaa
gaaatgagcggccaggccgaacagttgcagcagttgatggcgtttttcaaagtcgatgag
ggtggttctgaaaaatctcatacttctgtgcgcaaatctaagaatgccatggggtattcg
gctgttaagtcttcatccaagctcactggcaagtccgaagacgaatttgtcagtttctag

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