Nitrincola iocasae: F5I99_19050
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Entry
F5I99_19050 CDS
T06212
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
nik
Nitrincola iocasae
Pathway
nik02020
Two-component system
nik02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
F5I99_19050
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
F5I99_19050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
nik02035
]
F5I99_19050
Bacterial motility proteins [BR:
nik02035
]
Flagellar system
Chemotaxis proteins
MCPs
F5I99_19050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
TarH
DUF948
GCS2
GCIP_C
CENP-H
Motif
Other DBs
NCBI-ProteinID:
QEW08413
UniProt:
A0A5J6LJ39
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All DBs
Position
4108157..4109776
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AA seq
539 aa
AA seq
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MFKNMKIGTRLGLGFGLVLLLLSVIAFVGITRLSAVQDNFDVVVNENNVKIKAISNMRDS
LNISARSVRNMIILDNTEDKNSEYQRILEARKNYEEYSNTLVSLLVTDNARTFMTEIEAA
GTNTNTLFDMVIELTMAGREDEAREILLIKVRDAQSGWFSALDTMLQINERYNAELEQSA
RQNYKIAFTLMLTLAIAAALFSIGIAFWVTRSITRPIGSAVSVAEKLAEGDLTVEIDVDS
KDETGQLLAAMQRMVGKLSQIIGEVRSSGDALSSASEEVSATAQSMSQASSEQAASVEET
SASVEQMGASINQNTDSAKVTEGIASKAAQEANEGGEAVKETVMAMNTIADKISIIDDIA
YQTNLLALNAAIEAARAGEHGKGFAVVAAEVRKLAERSQVAAQEIGEVAKSSVGLAEKAG
KLLEEIVPGINRTSDLVQEITAASQEQSVGANQINTAMDQLNQITQQNASSSEELAATAE
EMSGQAEQLQQLMAFFKVDEGGSEKSHTSVRKSKNAMGYSAVKSSSKLTGKSEDEFVSF
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgttcaaaaatatgaaaatcggtacgcgcctgggcctggggtttggcctagtgctgctg
ttgctgtcggttattgcttttgttggtatcacccgattgtcggcggtacaagataacttt
gatgtggtcgttaatgaaaacaatgtcaagataaaagctattagtaatatgcgcgacagc
ttaaacatcagcgcgcgctcagtgcgcaacatgattatattagataataccgaggataag
aactcggagtaccaacgcatccttgaggcgcgcaagaactatgaagagtacagcaacacg
ctcgtcagtcttcttgttactgataatgccagaacgttcatgacagaaatagaagcagca
ggtacaaataccaatacgttgtttgatatggtcattgaactgactatggcaggtcgggaa
gatgaggccagagagattctcttaatcaaggttagggacgcgcagagtgggtggttctcg
gcgctggacactatgctccaaattaatgagcggtataacgcggagctcgaacaatccgcg
cggcagaattataagattgcctttaccttgatgctgacgttggctatcgcagcagcacta
ttctctatcggcattgctttctgggtcactcgcagcattacaaggcctattggttctgct
gttagcgtagccgaaaaactagctgagggtgacctgacggtagaaattgatgtggattcc
aaggatgagaccggccagttgctggctgcaatgcagcggatggtgggtaagttgtcgcag
attatcggcgaagtccgtagctcaggtgatgctttgtcatcagcctcagaagaagtcagt
gcaacggcgcagagtatgtcacaggcatccagcgaacaggccgcttcggtagaagaaacc
tctgcttcagtggagcagatgggggcttcgatcaatcagaacactgatagcgccaaggtc
actgaaggtattgcatctaaagccgcgcaggaagcgaatgagggtggtgaagcagttaaa
gaaacagtgatggcaatgaatactattgccgacaagatcagcatcatcgatgacatcgct
taccaaaccaacctgttggccttgaacgcggccattgaagcggcgcgtgccggagagcat
ggcaaaggctttgcggtggttgcggcggaagtgcgcaagttggctgagcgcagccaagtg
gccgcgcaggaaattggcgaagtagcgaagagctcagtgggcctagctgaaaaggcaggt
aaactgctggaagagattgtaccgggtatcaaccgcacttctgacctggtgcaggaaatt
actgcagcatcgcaggagcagtccgtcggtgcgaatcagattaataccgcaatggaccag
ttgaaccagatcacccagcagaatgccagctcatcggaagaactggcggcgacagccgaa
gaaatgagcggccaggccgaacagttgcagcagttgatggcgtttttcaaagtcgatgag
ggtggttctgaaaaatctcatacttctgtgcgcaaatctaagaatgccatggggtattcg
gctgttaagtcttcatccaagctcactggcaagtccgaagacgaatttgtcagtttctag
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