Nitrincola iocasae: F5I99_19375
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Entry
F5I99_19375 CDS
T06212
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
nik
Nitrincola iocasae
Pathway
nik03030
DNA replication
nik03430
Mismatch repair
nik03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nik00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F5I99_19375
03430 Mismatch repair
F5I99_19375
03440 Homologous recombination
F5I99_19375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nik03032
]
F5I99_19375
03400 DNA repair and recombination proteins [BR:
nik03400
]
F5I99_19375
Enzymes [BR:
nik01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F5I99_19375
DNA replication proteins [BR:
nik03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F5I99_19375
DNA repair and recombination proteins [BR:
nik03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F5I99_19375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
QEW08743
UniProt:
A0A5J6LJY6
LinkDB
All DBs
Position
unnamed1:36982..37842
Genome browser
AA seq
286 aa
AA seq
DB search
MDKSMEELEAARAEALEKDQCFSKGRLRDEFRMKPKPDAEPVTFYKNGYGGKFGVYKISD
CVPMKARSTKPPSEKQKRARAILAVKAKLNSKEAKTSSKAVRWLDENPLFLDTETTGLDD
QAQIIELAISDAQGTILLETKLRPSVSIDPEAEDVHGLTIEFLANAPTWPEVSDQVRKIL
CGRALVIFNADFDTRMFRQTAAAYGEPVEWVSELKTHCAMYLAADAFGPTNRHGSISLAD
AVDFAGVTWRGAAHGAVADTLATVDLVQAIGSIRRDLETELAALEE
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaagcatggaagagctggaagcggccagggccgaagccctcgaaaaagatcaa
tgcttttcaaaaggccgccttcgagacgaatttagaatgaaacccaagcccgacgccgag
cctgtcacgttctataagaacggttacggcggcaagtttggggtttataaaatatccgat
tgcgttcccatgaaggcacgtagcaccaagccgccgagcgaaaagcaaaagcgtgctagg
gcgattctggccgtcaaagcgaagctgaacagcaaggaagcaaaaacctccagcaaggcg
gtacggtggcttgatgaaaacccgcttttcctggacaccgagacaaccggcctcgatgac
caggcgcaaatcattgagctggctatcagcgacgcccagggaaccattttgcttgaaacg
aaattgcggccatctgtgtcgatagacccggaagccgaggacgtacacggcctaacaatt
gaatttctagcgaacgcaccaacctggccggaagtatcggaccaggtgcgaaaaatcctc
tgtggtcgcgctctggttatcttcaatgctgattttgatacgcgcatgttccggcaaacg
gctgctgcttatggtgagccggtcgaatgggttagcgaactaaaaacgcattgtgcgatg
tatctggctgccgatgcgtttggaccgactaaccggcatggttcaatctctttggctgat
gcggtagattttgccggggtaacttggcggggggcagctcatggggctgttgcagacact
ttagctacggttgacctggtgcaagcgatcggaagtatcaggcgtgacctggaaaccgag
ctggccgccctggaagaatga
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