Niallia sp. Man26: L8T27_000130
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Entry
L8T27_000130 CDS
T09959
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
nil
Niallia sp. Man26
Pathway
nil03030
DNA replication
nil03430
Mismatch repair
nil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8T27_000130 (dnaX)
03430 Mismatch repair
L8T27_000130 (dnaX)
03440 Homologous recombination
L8T27_000130 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nil03032
]
L8T27_000130 (dnaX)
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_000130 (dnaX)
Enzymes [BR:
nil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8T27_000130 (dnaX)
DNA replication proteins [BR:
nil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L8T27_000130 (dnaX)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L8T27_000130 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
DNA_pol3_gamma3
AAA_30
RuvB_N
AAA_assoc_2
AAA_22
TIP49
DnaX_C
AAA_16
AAA_19
AAA_5
Rad17
AAA_2
AAA_18
PIF1
Mg_chelatase
nSTAND3
AAA_14
AAA_7
AAA_24
DUF815
Sigma54_activat
TsaE
AAA_28
RNA_helicase
YqgC
Motif
Other DBs
NCBI-ProteinID:
UPO87699
LinkDB
All DBs
Position
1:27260..28975
Genome browser
AA seq
571 aa
AA seq
DB search
MNYQALYRVWRPQQFIDVVGQEHITKTLQNALLQQKTTHAYLFSGPRGTGKTSAAKILAK
AVNCERAPISEPCNECAACKGITDGSIPDVIEIDAASNNGVEEIRDIRDKVKYAPSSVPY
KVYIIDEVHMLSIGAFNALLKTLEEPPKHVIFILATTEPHKIPLTIISRCQRFDFRRITA
HSIVKRMKLIIDESGISCDDKALQMIARAADGGMRDALSLLDQAISYSQESVTVEDALTV
TGAVSQGFLNDLAKAVYEKDTVKGLQSLDELLFSGKDPSRFIEDFIFFYRDMLLYKTAPN
LEESLERVMLDDEFRNLADSYGQEQIYELIGLLNKTQQDMRWTNHPRIFLEVAIVKLCQM
AISSPTQDTGAFSNTEIQGLISKINSLEEELARIRQSGVTSSAEEAAPQKKVRATRKGFQ
APTGKINEILKQATKQELQNIKSNWGNMLGQLVKNQMRSQAALLNEAEPVAASTDSIVIK
FKYEIHCQMALDNVKFIETITLSLQQLLGRRYKLVGVPEEQWLKIREDFLSSSHHARSDE
ENEGNHVNQADDPVVAEARKLFGEELLEVKD
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaattatcaagcattataccgagtatggagaccacagcagtttattgatgtagtaggt
caggaacatataacgaaaacactccaaaatgcccttcttcagcaaaaaacaactcatgca
tatttgttctctggaccaaggggtactggtaaaactagtgcggcaaaaattttagcaaaa
gcagtcaactgtgaaagagcaccaatcagtgagccttgtaatgaatgtgccgcctgtaaa
ggaattacggatggttccataccggatgtaatagagatagatgctgcttcgaataatgga
gtagaagagataagagatataagagataaagtaaaatacgctccaagctctgttccgtat
aaagtttatataatagatgaagttcatatgctctctattggggcatttaatgctttgttg
aaaacacttgaggaacctcctaagcacgttatttttatattagctactacagagccacat
aaaattccattaacaatcatctctagatgtcagcgctttgactttagacgaattactgcc
cactctattgtaaagagaatgaagctaattatagatgaatccggcatttcatgtgacgat
aaggcgttgcagatgatagcaagagcggctgatggcggtatgcgggatgcattaagcctg
cttgatcaagccatttcctacagccaggaaagtgtcactgtggaagatgcgcttactgtg
actggggctgtttcccaagggtttcttaacgacttagcgaaagcagtctatgaaaaagat
acggttaaaggattacaatcattagatgaactcctattttcagggaaagacccctcaagg
tttattgaagactttatcttcttttacagggatatgcttctatataagacagcaccaaac
ttagaagagtcattagagcgggttatgcttgatgatgagttcagaaacttggctgactcg
tatggacaagaacaaatttatgaattgattggtttgctgaataagacgcagcaggatatg
cgctggactaatcatcctagaattttcctagaggtagcaattgttaaattgtgtcaaatg
gctatctcttctccaacacaagacacaggagccttttcgaacacggaaatacaagggctt
atttcaaaaataaacagtctcgaagaggaacttgcaagaattaggcaatcgggagtaaca
agttcagccgaggaagctgcaccacagaaaaaggtgagagcaactcggaaaggatttcaa
gcgcctactggtaaaattaatgagatacttaagcaggcaacgaagcaagaactccaaaac
attaagagtaattggggtaatatgcttggacagcttgttaaaaaccagatgagatctcaa
gctgctcttttaaatgaagccgaacctgttgctgcatctacggactcaatcgttatcaaa
tttaaatatgaaatccactgtcaaatggctttggataatgttaaatttatagagacaatc
acgttatctcttcagcagctgctaggcagaaggtataaattagtaggtgtccctgaagaa
caatggctaaaaataagagaagattttttaagcagttcccatcatgcaagatccgatgag
gaaaatgagggaaatcacgtaaatcaggcagatgacccagtagttgcagaggcaagaaaa
ctatttggtgaagaattgcttgaagtgaaggactga
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