Niallia sp. Man26: L8T27_000835
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Entry
L8T27_000835 CDS
T09959
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
nil
Niallia sp. Man26
Pathway
nil03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L8T27_000835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nil03021
]
L8T27_000835
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_000835
Enzymes [BR:
nil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L8T27_000835
Transcription machinery [BR:
nil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L8T27_000835
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L8T27_000835
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_5
SAM_EPH
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
UPO89430
LinkDB
All DBs
Position
1:149111..150055
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AA seq
314 aa
AA seq
DB search
MIEIEKPKIETVEINDDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAITSIQIDG
VLHEFSTIEGVVEDVTSIILNIKKLALKIYSDDEKTLEIDMQGEGVVTAADITHDSDVEI
LNPDLHIATLGSNGNLRMRLTAKRGRGYAPAEQNKREDQPIGVIPIDSIYTPVSRVNYQV
ENTRVGQLTNYDKLTFDVWTDGSTGPQDAIALGAKILTEHLNIFVGLTDEAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKTEEDMMKVRNLGRKSLEEVK
HKLEELGLGLRKDD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaaatagaaaaaccaaaaatcgaaacggttgagatcaacgatgatgccaaatac
ggcaaattcgtcgtagagccacttgagcgtggatatggtactactttgggtaactcctta
cgtcgtattctattatcctcactccctggtgccgctatcacatccattcaaattgatggg
gtacttcatgagttctcaacaattgaaggcgtcgtggaagatgtaacatctatcatattg
aacatcaaaaaactagcacttaaaatctactctgatgatgaaaaaactttagagattgat
atgcaaggtgaaggagttgtcactgcagcggacatcactcatgacagtgatgtagagatc
ttgaatccagatcttcatatcgctacattgggcagcaacggaaatcttcgcatgcgttta
actgctaagcgtggtcgtggatacgcacctgctgagcagaacaagcgtgaagatcagccg
attggtgttattccaattgactctatctatacgcctgtatctagagtgaattatcaagtt
gaaaacactcgtgttggtcaattgactaattatgataaactaacatttgacgtttggact
gacggtagtacaggtcctcaagatgctattgcacttggtgcaaagattttgacagagcat
ttaaacatcttcgttggtttaactgatgaagcacaaaatgctgagataatggtagaaaaa
gaagaagatcaaaaagaaaaagttcttgagatgacgattgaagagcttgatctatctgtt
cgttcttataactgcctaaaacgtgctggcattaatacagtacaagaattggcaaataaa
actgaagaagatatgatgaaggttcgaaatctaggtagaaaatctctggaagaagttaag
cataaactggaagagctaggtttaggcctgagaaaagacgactga
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