Niallia sp. Man26: L8T27_001655
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Entry
L8T27_001655 CDS
T09959
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
nil
Niallia sp. Man26
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nil03021
]
L8T27_001655 (sigB)
Transcription machinery [BR:
nil03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
L8T27_001655 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
DUF1492
GerE
DUF134
HTH_23
HTH_3
TnsD
HNF-1_N
Sigma70_ECF
HTH_28
HTH_37
YqzN_YkzM
TYA
KORA
SAS4
Motif
Other DBs
NCBI-ProteinID:
UPO87948
LinkDB
All DBs
Position
1:310572..311369
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AA seq
265 aa
AA seq
DB search
MPRQSQPKRQLTKEEVNELIKKFQLNQDEEAQNILVMNYRDLVEVLARKYSKGKMFHEDI
SQVGIIGLLGAIRRYDESFGKSFEAFAVPTIIGEIKRFLRDKTWSVHVPRRIKEIGPKIK
KTVEHLTTELQRSPKVDEIADYLEVSEEEVLEAMEMGKSYQALSVDHSIEADSEGGTVTL
LDIVGDVDKGFERVNQKLVLEKVLHVLSEREKSIIQYTYLDNMSQKEAGDKLGISQMHVS
RLQRRAIKKLQEAIHAESSNSEFIL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgccgagacaatctcaacctaagcgccaattaacaaaagaagaagtaaatgagctaata
aaaaaattccagctaaatcaagatgaggaagcccagaatatacttgtgatgaattatcgg
gatttagtagaagtgctggcaagaaagtactctaaaggaaaaatgtttcatgaggatatc
agccaggtaggcataatcgggctgctcggagctattcgcagatatgacgaaagttttggg
aaaagctttgaagcatttgctgtgccgactattataggtgagataaaaagattcttacga
gacaagacgtggagtgtccatgttcctagaagaataaaagagattggtccgaaaataaag
aaaacagtagagcatttaacaactgaattacaaagatcaccaaaagttgatgaaattgct
gactatctagaagtctctgaagaggaagtgcttgaggcaatggagatgggtaaaagctac
caagctttatctgttgaccattccatcgaggcagactctgagggcggtacagtaaccttg
cttgatattgtaggggatgtagataaaggctttgagcgtgtcaatcaaaagcttgtgctt
gaaaaagtgctgcatgtattgagtgagagggaaaagagtatcattcaatatacatacctg
gataatatgagccagaaggaagctggtgacaagctcggaatttcccaaatgcatgtctcc
agactgcaaagaagggcgattaaaaaactccaggaagcgattcatgctgaatccagcaat
tcggagtttattctatga
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