Niallia sp. Man26: L8T27_002085
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Entry
L8T27_002085 CDS
T09959
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nil
Niallia sp. Man26
Pathway
nil03420
Nucleotide excision repair
nil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L8T27_002085 (pcrA)
03430 Mismatch repair
L8T27_002085 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_002085 (pcrA)
Enzymes [BR:
nil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8T27_002085 (pcrA)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8T27_002085 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
L8T27_002085 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
RasGEF
Motif
Other DBs
NCBI-ProteinID:
UPO88011
LinkDB
All DBs
Position
1:395957..398164
Genome browser
AA seq
735 aa
AA seq
DB search
MQFLTDKILNGLNPEQQKAVKATEGPLLIMAGAGSGKTRVLTQRIAYLMVEKGVNPYNIL
AITFTNKAAKEMRHRIAGVLGGASEDIWISTFHSMCVRILRKDIDRIGYNRNFTILDTTD
QQSVVKQILKERNIDPKKHDPRAILASISSAKNELITPEEYAKTAGDYFAQIASDVYTEY
QRRLRKNHALDFDDLIMQTIHLFQRVPEVLEFYQRKFQYIHVDEYQDTNRSQYMLVKLLA
SRFRNLCVVGDSDQSIYRWRGADIANILSFEKDYPNATVVMLEQNYRSTKKILQAANKVI
ENNTGRKDKNLWTENEDGNKIHYYRADSEQGEAQFVIGKIQEIRRETSKKLADIAILYRT
NAQSRVMEEMLLKSNIEYSIVGGIKFYDRKEIKDTLAYLRLIANPDDDISLQRVINVPKR
GIGSSSIDKIANFAAMHDMSMYDAIESVELIGLSPKITKSVAEFHNFIRKYSEMQEYLSV
TELVEEVIEKSGYLEALKAEKSIESQSRIENIEEFMSVTKNFEDTNEDKSLIAFLTDLAL
VADIDKLDDDGNQADAVVLMTLHSAKGLEFPVVFLIGLEEGVFPHSRSLMEEVEMEEERR
LAYVGITRAEQQLFITNAQMRTLFGRTNMNPPSRFIKEIPEDLLEGVPERKSESRFSARP
AAPAARKAVIRPAARTTGGEDIGWNVGDKAVHGKWGTGTVVSVKGDGDSKELDIAFPSPV
GIKRLLAKFAPIQKG
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacagataaaatattaaatggtttaaatcctgaacagcaaaaggctgtt
aaggcaacagaaggcccgcttcttataatggcaggagcaggaagtggaaagacaagagtg
cttacacaaagaatcgcttatttgatggttgaaaaaggggttaatccatacaacatctta
gcgataacatttacgaataaagcagcaaaggaaatgagacataggattgcaggagtgctt
ggcggcgcgagcgaggatatctggatttccacattccactccatgtgtgtccgcatcctg
aggaaggatatcgacagaatcggctataacagaaactttacgattttggatacgacagac
caacagtctgtagtaaagcaaattttaaaggaaagaaacatcgatccgaagaaacatgat
cctcgggcgatattggcaagcatcagctctgctaaaaacgaactgattacaccagaggaa
tatgcaaaaacagcaggggattatttcgctcagattgccagtgatgtatataccgaatac
caaagacgtttaagaaagaaccacgctttggatttcgatgacttgattatgcagacaatc
cacttgttccagcgtgtaccggaagttcttgaattttatcaacgcaagttccagtatatt
catgtagacgagtatcaagatacgaatagatctcagtatatgcttgtaaaactgcttgca
agcagattccgcaatctttgtgttgtaggtgattctgaccagtctatttatcgttggcgc
ggggcggatattgccaacatcctttcattcgagaaggattacccgaacgcaacggtggtc
atgcttgagcaaaactaccgttctacgaagaagattcttcaagctgccaacaaagttatt
gaaaacaacacaggcagaaaagataaaaatctgtggacggaaaatgaagatggaaataaa
attcattactatcgtgcagacagtgagcaaggggaagcacaatttgtgattggtaagatc
caagaaatcagaagagaaacctcaaaaaaactggctgatattgcgattctttaccgtaca
aatgctcaatctcgtgtaatggaagaaatgcttctaaaatcaaatattgaatattccatt
gtcgggggaataaagttctacgatagaaaagaaattaaagatacacttgcttatttaaga
ctgattgcaaatcccgatgatgatattagcttgcaaagggtcataaatgtgccgaaacga
gggattggttcaagctctatcgataaaatcgctaattttgcagcaatgcatgatatgtct
atgtatgatgcgattgaatcagttgagctaattggattaagcccaaaaatcacaaaatca
gtagcagaattccacaacttcatccgtaagtacagtgaaatgcaggagtacttgtctgta
acggagctggtggaggaagtgattgaaaagtctggttatctagaggcgctgaaagcagag
aaatcgattgaatcccaaagcagaattgagaatatcgaggagttcatgtctgttacgaaa
aactttgaggacacgaatgaagacaagtctttaattgccttcctgacagatttagctctt
gttgcagacatcgataagcttgatgatgacggcaatcaggcagatgctgttgtactaatg
acgctccactcggcaaaaggactggagtttccagtagtattcttgattggtctggaagaa
ggagttttcccgcattcccgttcccttatggaggaagtggaaatggaggaggaaagaaga
cttgcctatgttgggattacaagggcagaacagcagctgttcataacaaacgctcaaatg
agaacattgtttggtcgtacgaatatgaatcctccttcccgtttcattaaggaaatacca
gaagatttattagaaggagttccagaaagaaagagcgaatcgagattcagtgccagaccg
gcagcacctgcagcaagaaaagcagttatacgccctgcggcaaggacaacaggtggagag
gatattggctggaatgtcggagataaggcggttcacggtaaatggggaaccggtacggta
gtaagcgttaagggagacggagactccaaggagcttgatattgcattcccaagtccggta
ggcataaagagactattggcgaaatttgcgccgatccaaaaaggctga
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