Niallia sp. Man26: L8T27_004235
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Entry
L8T27_004235 CDS
T09959
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
nil
Niallia sp. Man26
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_004235 (addB)
Enzymes [BR:
nil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8T27_004235 (addB)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
L8T27_004235 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
UPO88384
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All DBs
Position
1:811916..815413
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AA seq
1165 aa
AA seq
DB search
MSVRLLSGRSGSGKTAFCIDSIREKLFADPEGNPIIYLVPDQMTFLSDQSLAASEGLGGM
FRAQVYSFTRLAWRVLQETGGISRQHINSVGISMLIRSIIEEKKEELFLFKKVADKNGFI
GQVEQLVTEFRRYCVTPEELDSRQQDIEGAGDGDKALLDKLHDLEIIYQSFEENMLGKYI
DGEDYFRLLAEKINSSEYLKKAEVFIDGFYSFTPQEYLIIQELIQVCENVTITFTMDKPD
RNSFADELDLFRMSKETYATVYEMARQIGVEVEEENFAEVHKNMHHSLQHIEAHFDSRPA
LPFFGESAVLFAESVNPRAEIEGIAREIKKLIRKKGYRYRDISLLSRNTVEYQNIIETIF
ADYEIPFFIDQKRTMHFHPLVELIRSTLEIIETNWRYEPVFRAIKTELLFPMHMQKRNIR
ENVDKLENYCLAYGIKGEKWTSKERWKYRRFQGLEWDQGVQTDSERQMEQELNELRLSLA
APITRLATRLKRAKSGRAKCEALYLYLEELEVPEKMELWKVELEEQGELVKAGEHDQAWN
SIIDLLDQFVEILGDEEIARKQFATILDAGLDTLKFSLVPPAIDQVLIADLENSRLGTIK
AAFVIGMNEGVFPAKFTDEGIFADSDRESLVEAGMKLAPTSKTRLLDEEFLAYKAFTTPS
DRLYLTYPLANDEGKSLLPSVYVKRMRDFVPEAKTLYFMADPKDLSSLGQLDYAVDMRTS
LSYLNGQLQLKKRNYQIYDFWWDVYNTYIEDPKFQPIAKKVFSSLTYQNRTSELTEETSS
DLYGESITASVSRMELFQSCPFSHFATHGLKLRERQVYRLEAPAIGDLFHAALKYIAETV
LHENMMWSDLTRQQCEVLAKDAVEMLAPKLQNEILLSTNRHHYIKRKLEQIISRASFILS
EHAKYSGFAPIDLELEFGPKGKLPPMAFSLKNGTKMELVGRIDRVDKAELDNEVYLRVID
YKSSAHELNMNEVYYGLSLQMLTYLDLIISNSSILVDKEANPAGVLYFHVHNPILSSKKI
LTLDEIEEELFKKFKMNGLMLGKEEVIKLMDGSLEKGDSPIVPAGVKTDGTLTKRSKVAS
REDFYSLQKFVRHKYVETGNKIIGGNVDISPYQLKEKSPCTFCSFKSVCQFDEGLESNQY
RKLQTFSKEEALDLIRKEANTHEEY
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttagattattatccggacgatcaggcagcggaaagactgccttttgtatagat
tcgattcgggagaagctgttcgcagatcctgaaggcaatccaattatttacttagtgcca
gatcaaatgacatttctgtcagaccaaagcttggctgcgagcgaagggcttggcggcatg
ttccgtgcccaagtttacagctttacaagacttgcgtggagggttttgcaggagactgga
ggcatctcgagacagcatattaacagcgtcggaatcagcatgctcatccgcagcattatc
gaagaaaagaaagaagagttgttcctgtttaagaaggtggcagacaagaacggctttatt
ggacaagtcgaacagcttgtaacagaattcagaagatattgcgttacaccagaggagctt
gacagcaggcagcaagacatagagggagctggagatggcgacaaggctcttttggacaaa
ctgcatgatttggaaattatttatcaaagcttcgaggaaaatatgctgggcaagtatatt
gatggagaagattatttccgcctccttgcagagaaaatcaacagctctgaatatttaaag
aaagcagaagttttcattgacggtttctacagctttacaccgcaggaatatttaattatt
caggagcttatccaggtttgtgagaatgtaacgattacttttactatggacaagcctgac
cgaaacagttttgcagatgaattagaccttttccggatgtcaaaggaaacttacgcaact
gtttatgaaatggcaagacaaatcggtgtggaagtagaggaggaaaattttgctgaagtg
cataaaaatatgcaccactcccttcaacatatcgaggcacattttgacagcaggccagct
ctcccgttttttggagaaagtgctgtgttgtttgcagaaagcgttaatccgagggcagaa
atagagggcattgctcgggaaattaaaaagcttattagaaaaaaaggctaccgctatcgt
gatattagtctcttatcccggaatacggtagaataccaaaatataatagaaactatcttt
gccgattatgaaattcctttttttattgaccagaaaagaacgatgcatttccatccgctt
gtcgagctgattcgctctaccttggaaataatagaaacaaactggcggtacgagcctgtt
ttcagggcaattaagacagagctgctgtttccaatgcatatgcaaaagcgcaacatcaga
gaaaatgtggacaagctagaaaactactgcttagcatatggaataaagggagaaaaatgg
acgagcaaggaacgctggaaatatagaagatttcaagggctagaatgggatcaaggggta
cagacagacagtgaaagacaaatggagcaggagctgaatgagcttcgcctttcattggct
gcaccgattacacggctggccaccaggctgaagagagcaaaatcaggaagagcaaaatgt
gaggctctatatctctacttggaagaactagaggttccagaaaaaatggaattatggaaa
gtggagcttgaagagcagggggagcttgttaaagcaggtgaacacgaccaagcgtggaac
agcatcatagaccttctcgatcaatttgttgagattttaggagacgaggagatagcaaga
aaacaatttgcgaccatattggatgctgggcttgatacccttaagttttctttagttccg
ccagcaatagatcaggtgcttattgctgatcttgagaactccaggcttggcaccataaag
gctgcctttgttatcgggatgaatgaaggggtttttcctgccaagtttacagatgaaggg
atttttgcagacagtgacagggaaagtcttgtagaagctggaatgaagctagcacctaca
agcaaaactagattgcttgatgaagagtttcttgcatacaaagcatttacaacaccgtct
gacagattgtatttaacatacccgctggcaaatgatgaaggcaaatctctgctgccatct
gtgtatgtaaaacggatgcgcgattttgtgccagaagcaaaaacgctctactttatggct
gatcctaaggatctttccagtctcggacagctcgattatgcagttgatatgagaacaagc
ttgtcttacttaaatggccagctgcagctgaagaaaagaaattaccaaatttatgatttt
tggtgggatgtttataacacctatatagaagaccctaaattccagccaatcgcgaaaaaa
gtgttctcaagcttaacctatcaaaacaggacgagtgagctcacagaagaaacgagcagc
gatttatatggggaaagcataacagcgagtgtttcacggatggaattgttccagtcatgt
ccgttttctcattttgccacacatggcttaaagcttagagagagacaagtgtacagactt
gaggcgcctgctattggagacttatttcatgctgccttgaaatatattgctgaaacagtg
cttcatgaaaatatgatgtggtcggatttgacgagacagcaatgtgaggttctagcaaaa
gatgctgtcgaaatgcttgctcctaaattgcaaaatgagatattgctgagcacaaacaga
catcactatattaagagaaagctggagcagattattagcagagcttctttcatcctgagc
gagcatgccaaatacagcggctttgcaccgattgatttggagctggaatttgggccgaaa
ggcaagcttccgccaatggccttttcgttaaagaatggcacgaaaatggagcttgtcggc
aggattgaccgtgttgacaaagctgagcttgataatgaagtatatttgcgtgtaatcgat
tataaatcaagtgcacatgaactcaatatgaatgaagtatattacggcctgtctttgcaa
atgctgacatatttagatttgattatttccaacagcagcattcttgttgataaagaagca
aatcctgcaggagtgctatacttccatgtccataatccaatcttgagcagcaagaaaatc
ttgacgcttgatgaaatcgaagaggaattgtttaaaaagtttaagatgaatggattaatg
cttggaaaagaggaagttattaagctgatggacggcagtcttgaaaaaggcgattcacct
attgttccagcaggtgtgaaaacagacggaacattaacgaaacgttctaaagttgcaagc
agggaggacttttattcccttcagaaatttgttcgccataaatatgtggaaacaggcaat
aaaataattggcggcaatgttgatatttctccgtatcaattaaaagaaaaatcaccatgt
acattttgttcattcaagtctgtctgtcagttcgatgaaggtcttgaatcaaaccaatat
cgaaagctgcaaaccttctcgaaggaagaagcacttgatttgatcagaaaggaggcaaac
acacatgaagagtattga
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