Niallia sp. Man26: L8T27_004760
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Entry
L8T27_004760 CDS
T09959
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nil
Niallia sp. Man26
Pathway
nil03420
Nucleotide excision repair
nil03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L8T27_004760
03430 Mismatch repair
L8T27_004760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_004760
Enzymes [BR:
nil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L8T27_004760
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8T27_004760
MMR (mismatch excision repair)
Other MMR factors
L8T27_004760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
ResIII
DEAD
GpA_ATPase
CoiA
FR47
Motif
Other DBs
NCBI-ProteinID:
UPO88482
LinkDB
All DBs
Position
1:complement(916919..919225)
Genome browser
AA seq
768 aa
AA seq
DB search
METAYYYDRLIHLYADTRSDWQTWHEAGKKGLLACSVCGEAVKLYLGIKAKPHFYHASTS
EPCQQNITPAVSEAAAAVEYEERNGFRFPKSRSISTPIEEISFKQPKIIQTVTDTAAKVS
RPDYNAPDSYLHALSLSGVKLDESQCNAVTTDEEAVLVVAGAGSGKTRVLTARTAYLIHE
KKIDPASIMLVTFTSKAALEMKERLMKYPDMTKTVISRIVSGTFHSILYQILLFHEPNKW
KRTNLLSSNWQKELILKEIGTELGIDMKEFPYDAALQLIGAWKNSLQFPNEIKPASDWEE
KVLPLYKKYEETKHNKGQYDFDDMLVGGYYFFLENPKILETYQNRFSYFLLDEFQDINKV
QYEWIKLMSQRAKSIYAVGDDDQAIYAFRGSDPKYLLDYEKDFKNAKIIYLKNNYRSTNE
IVSSANDIIKANKNRRPKKMAATYTGQNPLLFYPYDEEEEATMIVTDILEKIQKGAEPTD
FAILFRTNTNSRAMFERLSSSSLPFRLEQDSGSFYSRFIVKSMIAYLKLAVDPDDQHAVN
SLLPTLFLKKSVLQDLKALSILEDCSLADGFAKIKTGFAFQESRLKKIPDALKKLKSTPP
LEAIAFIEKELGFQEFIKKRGNEGNQWDKGSDDLRDLKVVAKKFGTIAEFVAYTDHMIAM
NAELKKQYKDTKNAISLTTIHRAKGLEYKIVYILGGVDGSLPHDYALEAFRNGDNLPMEE
ERRLLYVAMTRSMAELYVSIPMHLRGRKAKASRFLSALRLAPIHKNKE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagcctactattatgatagattgatacatttatatgctgatacgagaagcgac
tggcagacttggcatgaagctggaaaaaaaggccttcttgcttgctcagtctgcggtgag
gctgtaaagctttatttgggtattaaagcaaaaccgcatttttaccatgcttccacttca
gagccttgccagcaaaatattactccagctgtcagtgaagcagctgctgctgttgaatat
gaagaaagaaacggatttcgttttcctaaatctcgaagcatttcaacaccgattgaagaa
attagctttaaacagcctaaaatcatccaaactgttacagatactgctgctaaggtgagc
agacctgattataacgcgccagacagttatcttcatgctctttcccttagtggcgtcaag
cttgatgaatcccaatgcaatgccgtcacaacagatgaggaagcagtattggttgttgca
ggtgccggaagcggaaaaacacgagttctgacggcgagaactgcctatctcatccatgag
aagaaaattgatcctgcctccatcatgctagtaacatttacgagcaaagctgcattagaa
atgaaagaacggcttatgaagtatcctgacatgaccaaaacggtaatcagccggattgtt
tcagggaccttccacagtatcctgtatcaaatactcctttttcacgaaccaaataaatgg
aaaaggaccaatttgctgagcagcaactggcagaaagaattaatcctaaaagaaattggc
acagaattaggaattgatatgaaagaattcccatatgatgctgcccttcaattgattgga
gcatggaagaattctttgcaatttccaaatgaaattaagcctgcttctgattgggaagag
aaggtattgccactttacaaaaaatatgaagagacaaagcataacaaaggccaatatgat
tttgacgatatgcttgtcggcggatattactttttccttgaaaatcctaaaatacttgaa
acataccaaaacagattttcctatttcctgctagacgaatttcaagacattaataaagtc
cagtatgaatggataaaattgatgtcccaacgagcgaaaagtatttatgcagttggagat
gatgatcaggctatttatgcatttcgaggcagtgacccgaaatacctgctggattatgaa
aaggactttaaaaacgccaaaattatttatctgaagaataattaccgctctactaatgaa
attgtatcatcagcaaatgatattataaaagcaaacaaaaacagacgtcccaaaaaaatg
gctgcgacctatactggacaaaatcccctcctcttctatccttatgatgaagaggaagaa
gcaacaatgatagtcacagacatattagaaaaaattcaaaaaggggcagaaccgacggac
ttcgccattctgtttagaactaatacaaacagcagggcaatgtttgaaagactgtcttcc
tcaagtcttccatttagactcgagcaggattctggttccttttacagccgctttatcgtc
aaaagcatgattgcttacttaaagcttgctgttgacccagatgatcagcatgctgttaac
agtttgctgccgacattatttctcaagaaaagtgtgcttcaagacttaaaagcattaagt
attttggaagattgcagcctggctgacggattcgcaaaaattaaaaccggatttgccttt
caggaatcgagactaaaaaaaattccagacgctctgaaaaaactaaaatcaactccccct
ttagaggccattgcctttattgaaaaagaactcggcttccaagagttcattaaaaaacgg
ggaaatgaaggaaatcaatgggataaaggctctgacgatcttcgagatcttaaagttgtc
gctaaaaagtttggcaccattgctgaatttgttgcctatacagaccatatgattgccatg
aacgcagaactgaaaaaacaatataaagatacaaaaaatgcaatcagcctgacaaccatt
catcgtgccaaaggacttgaatataaaatcgtctatattctaggcggtgttgacggttcc
cttcctcacgattatgcattggaagccttccgaaatggcgacaatctgcctatggaagaa
gaaaggcgactattatatgttgcgatgacaagatcaatggcagagctgtatgtatccatt
ccgatgcacttgaggggaagaaaagcaaaagcatcccggttcttatctgctttaagactg
gcaccaatacacaagaataaagaataa
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