Niallia sp. Man26: L8T27_006980
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Entry
L8T27_006980 CDS
T09959
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
nil
Niallia sp. Man26
Pathway
nil02024
Quorum sensing
nil03060
Protein export
nil03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
L8T27_006980 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
L8T27_006980 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
L8T27_006980 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
nil02044
]
L8T27_006980 (ffh)
Enzymes [BR:
nil01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
L8T27_006980 (ffh)
Secretion system [BR:
nil02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
L8T27_006980 (ffh)
Eukaryotic Sec-SRP protein
L8T27_006980 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_30
Zeta_toxin
AAA_22
AAA_17
CbiA
AAA_31
MMR_HSR1
cobW
AAA_33
AAA_19
AAA_16
6PF2K
APS_kinase
NPHP3_N
DUF2058
AAA_28
ResIII
TsaE
Motif
Other DBs
NCBI-ProteinID:
UPO88902
LinkDB
All DBs
Position
1:1403214..1404566
Genome browser
AA seq
450 aa
AA seq
DB search
MAFEGLADRLQNTIQKIRGKGKVNEADVKEMMREVRLALLEADVNFKVVKEFVKKVSERA
VGQEVMKSLTPGQQVIKVVKEELTELMGGEQSKIAVSNRPPTVIMMVGLQGAGKTTTTGK
LANLLRKKHNRKPLLVAADIYRPAAIKQLETLGKQLDFPVFSLGDQVSPVEIAKQAIAKA
KEDHHDYVLIDTAGRLHVDEALMDELKQIKELSNPDEIFLVVDAMTGQDAVNVASSFNEQ
LGLTGVVLTKLDGDTRGGAALSIRSVTQTPIKFVGLGEKMDALEAFHPERMASRILGMGD
VLSLIEKAQMNVDEEKAKELEMKMKTASFTLDDFLEQLGQVRNMGPLDELLKMMPGANKI
KGLDNLQVDEKQISHVEAIIRSMTKAEKEHPEIINSSRRKRIAKGSGRTVPEVNRLLKQF
EDMKKMMKQMTGMTQKGKKKGKFKLPFNPF
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcatttgaaggtttagctgaccgactgcagaatacgatccaaaagatccgcggaaaa
gggaaagtaaatgaggcggatgttaaggaaatgatgcgtgaagtccgacttgcattgctt
gaggcggatgttaactttaaggtagtcaaagagtttgttaaaaaagtcagtgagcgtgct
gttggacaagaggttatgaaaagtctgactcctggacagcaggtcattaaagttgttaaa
gaagaacttacggagctgatgggcggagaacaaagcaagattgctgtatccaaccgtccg
ccgacagtcattatgatggttggtttgcaaggtgccggtaagacaactacaactggaaaa
ttggctaatttactgcgtaaaaagcataatagaaagccgttgcttgttgcggcagacata
tatcgtcctgcggctattaagcagctcgaaacacttggtaagcagctcgatttccctgtt
ttttcacttggagatcaagtcagccctgttgagattgcgaaacaggcgattgctaaagca
aaagaagaccatcatgattatgtgttaatcgatactgcaggtcgtctgcatgtggatgaa
gcattgatggacgagttaaagcaaattaaagagctttccaatccagatgaaatattcctt
gtagttgatgcgatgacaggtcaggatgcagtcaatgtggcaagcagctttaacgagcag
cttggactgacaggtgtcgtattaacgaagctagatggtgacactcgaggcggggcagcg
ttatctattcgttctgttacacaaacaccgattaaatttgtcggtttgggtgaaaagatg
gatgcattagaggcgttccatccagagcgtatggcatcacgtattcttggaatgggtgat
gtgctaagcctaatcgagaaagcgcaaatgaatgtcgatgaagaaaaggcaaaagagctg
gaaatgaaaatgaaaacagcttcctttactttagatgactttttagaacagcttggacag
gtccgtaacatggggcctcttgatgagctgctgaaaatgatgccaggagccaacaaaatc
aagggcttggataatctccaagtagatgaaaagcaaatcagccatgtggaagcgattatt
cgctccatgacaaaggcagaaaaagaacacccggaaatcatcaactcaagcagacggaag
cgtatagctaaagggagcggcagaaccgttcctgaagtgaacaggctgttgaagcagttt
gaggacatgaaaaaaatgatgaaacaaatgacgggtatgactcaaaaaggcaagaaaaaa
ggcaagtttaaattaccatttaaccctttttaa
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