Niallia sp. Man26: L8T27_007055
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Entry
L8T27_007055 CDS
T09959
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nil
Niallia sp. Man26
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nil03032
]
L8T27_007055 (topA)
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_007055 (topA)
Enzymes [BR:
nil01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
L8T27_007055 (topA)
DNA replication proteins [BR:
nil03032
]
Prokaryotic type
DNA Topoisomerases
L8T27_007055 (topA)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L8T27_007055 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_RPB9
Toprim_4
Toprim_2
Toprim_3
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
UPO88917
LinkDB
All DBs
Position
1:1415425..1417503
Genome browser
AA seq
692 aa
AA seq
DB search
MSEFLVIVESPAKAKTIERYLGKKYKVKASMGHIRDLPRSQMGVDTDKEYEPKYITIRGK
GPVLKELKTAAKKAKKIYLAADPDREGEAIAWHLANSLQVDVDSDCRVVFNEITKDAIKE
SFKHPRPINMDLVDSQQARRVLDRLVGYNISPLLWKKVKKGLSAGRVQSVAVRLIIDREK
EIKAFEPEEYWTIESDFAKGKTSFEAAFYGLKNKKMELHSQADVDNIKKQLNGNKFTVEK
VTKKERKRNPAVPFTTSSLQQEAARKLNFRAKKTMMLAQQLYEGIDLGKKEGTVGLITYM
RTDSTRISEVAQNEAYEYITANYGKEYTKEENRKEKKNTNAQDAHEAVRPTSTFKEPNSL
KEHLSRDQLRLYKLIWERFIASQMAPAVMDTMSVDLRNGDVIFRATGSKIKFPGFMKVYV
EGSDDAVEEQNKQLPDLQEGDEVINKDINPKQHFTQPPPRYTEARLVKTLEELGIGRPST
FAPTLDTIQKRGYVALDNKRFIPTELGEIIHELILEFFPEILDVEFTAHMEQNLDNIESG
QINWVKVIDSFYKIFEQSLEKAEKEMQSVEIKDEPAGEDCEECGSPMVFKMGRYGKFMAC
SNFPDCRNTKAIVKEIGVKCPKCREGNIIERKSKKRRIFYGCDRFPECDFISWDKPIQRP
CPKCDNMLVEKKLKKGVQVQCVECDYKEEPQS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcagagtttctagtaatcgtagagtcgcctgcaaaggcaaaaacgattgaacgttat
ttaggaaaaaaatataaagtaaaagcatcaatgggacatataagagatctaccaagaagc
caaatgggtgttgatactgataaagaatatgaaccgaagtacataacgatccgcggaaaa
ggtcctgttcttaaagaattgaagacagcagccaaaaaggcaaaaaagatttatcttgca
gccgaccccgatagagaaggggaagcaattgcctggcatttagccaacagtctgcaggtt
gatgtagattcggattgccgtgtcgtatttaatgaaatcacaaaagacgccattaaagaa
tcatttaaacacccccgtccaattaatatggatctagttgattcccagcaagcaagacgg
gtgcttgatcgcctagtaggctacaacatcagcccgctgttatggaaaaaggtcaaaaaa
gggcttagcgcaggaagagtgcaatctgtcgcagttcgtttaatcatcgacagagaaaaa
gagattaaagcattcgaaccggaagagtactggacaattgaatcagacttcgcaaaaggg
aaaacaagctttgaagcagctttttacgggctgaaaaataaaaaaatggagctgcattct
caagcggatgtagacaatattaaaaaacagctcaatggcaataaatttactgttgagaag
gtaacgaagaaggaacgtaaacgaaacccagcagtaccttttacaacatcctccctacag
caggaagctgcgcgaaagctaaacttcagggcgaaaaagacaatgatgcttgcccagcag
ctttatgaaggaatagatttaggcaaaaaagaagggacagtcggtttaatcacctatatg
agaacagactcaacccgtatttctgaagtggctcaaaatgaagcgtatgaatatataaca
gccaactacggaaaagagtatacgaaagaagaaaaccgcaaagaaaagaaaaatacaaat
gcacaggatgcccatgaagcggtaagacctacaagtacgttcaaggagccaaactccctg
aaagagcacctttctcgagaccagcttcgcttgtataagctgatctgggaaagattcatt
gcaagccaaatggcgcctgctgtgatggatacaatgagtgtagatttacgtaacggggat
gtcatattccgtgcaacaggttcaaagattaagtttcctgggtttatgaaggtgtatgtg
gaaggatcagatgatgcggttgaagagcagaacaaacagcttcctgatttgcaagaggga
gatgaagtcatcaataaggacatcaatccgaagcagcacttcacacagccgccaccaagg
tatacggaagcaaggcttgttaaaacattagaagagcttggaattggccgtccttccaca
tttgcgccgactttggatactatccaaaaacgcgggtatgtggctctcgataacaaaaga
tttataccgactgagcttggagaaatcattcatgaattgattctcgagtttttcccggaa
atccttgacgttgaatttacagcacatatggagcagaatcttgataatattgagtcaggc
cagatcaattgggtaaaggtaatcgatagtttttataagatttttgaacaaagtctcgaa
aaagctgaaaaagaaatgcaatctgtcgaaataaaggatgagcctgcaggggaagactgt
gaggaatgcggcagtccgatggtatttaaaatgggcagatatggcaagtttatggcatgc
agtaatttcccggattgccgcaatacgaaggcaattgtcaaggaaatcggtgtgaaatgt
cctaagtgccgcgaaggtaatattattgaaagaaaaagcaaaaaacgccgaattttctac
ggctgtgaccgttttccggagtgcgatttcatttcatgggataaaccaatacagcgtcca
tgtccgaaatgtgataatatgcttgtagagaaaaagctgaaaaaaggtgtccaggtccaa
tgtgtagagtgtgactataaggaagaacctcaaagctaa
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