Niallia sp. Man26: L8T27_013665
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Entry
L8T27_013665 CDS
T09959
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nil
Niallia sp. Man26
Pathway
nil03030
DNA replication
nil03430
Mismatch repair
nil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8T27_013665 (holA)
03430 Mismatch repair
L8T27_013665 (holA)
03440 Homologous recombination
L8T27_013665 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nil03032
]
L8T27_013665 (holA)
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_013665 (holA)
Enzymes [BR:
nil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8T27_013665 (holA)
DNA replication proteins [BR:
nil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L8T27_013665 (holA)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L8T27_013665 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DUF749
DNA_pol3_gamma3
DUF1848
DUF4411
ILEI
ABC2_membrane_3
Motif
Other DBs
NCBI-ProteinID:
UPO86630
LinkDB
All DBs
Position
1:complement(2690585..2691607)
Genome browser
AA seq
340 aa
AA seq
DB search
MMQEIWKKIKRQEFAPVYLMYGPESFLINETRTLLVQTALNPDEEDFNLSVYDLEEVSIE
LAIEDAETIPFFGDRKVVILQNPFFLTSEKTKSKVEHDVKRLEAYLKEPSPYTIVVFTGS
YEKLDERKKITKELKKTAEILEAKKLNEQELKNWMKQRASYNKVELDNDALEALLSIAGT
NLFLLTSEVDKMALYVQDSKLITKEIVEELASKSLEQNIFALVEKIINKRIDEALRIYYD
LLKQNEEPLKMLAIITNQFRLIYQVKALSKTGYGQQQIASVLKVHPFRVKLAAGQANRFT
DEELTRCISMFAEADYQMKTGAANKTMIIEMILFKLGQAK
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ttgatgcaagaaatttggaaaaaaattaaaaggcaagaatttgcgcctgtttatttaatg
tatgggccggaatcatttctaataaatgaaacaagaacattattggttcaaacagcttta
aatcctgatgaagaagattttaacctgtctgtatacgacttagaggaagtcagtattgaa
ctggcaatagaagatgcggaaacaattccgttttttggagacagaaaggttgttattctg
cagaacccgttttttctaacaagtgaaaagacaaaatcgaaagtggaacatgatgtaaag
agacttgaagcttatttaaaggagccctctccttatacgattgttgtctttacaggcagt
tatgaaaagcttgatgagcggaagaaaattacgaaagaactaaaaaaaaccgcagaaatt
ttagaagctaagaaattaaatgaacaggaattaaaaaactggatgaaacaaagagcatcc
tacaataaagtcgaactggacaatgatgcccttgaagctttgctcagcattgctggaaca
aatttgttccttttaacaagtgaagtagataagatggcgctgtatgtacaggattctaaa
ttgattaccaaggaaatagtggaagaactcgcttctaaatcattggaacaaaatattttt
gcgcttgtggaaaaaatcattaacaaacgaattgatgaggcattaagaatttattatgat
ttattgaaacaaaatgaagagccgttaaaaatgctagcaattatcacaaaccaattccga
cttatttatcaagttaaagcactatcgaaaacgggctacggacaacagcaaattgcgtct
gttttaaaagttcacccatttcgtgtcaagctcgctgcaggccaagctaaccgctttact
gatgaagagctaacaaggtgtatcagcatgtttgctgaagccgactaccagatgaagacg
ggcgctgcgaataaaacaatgattattgagatgattctatttaaattgggacaggctaaa
taa
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