Niallia sp. Man26: L8T27_013890
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Entry
L8T27_013890 CDS
T09959
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
nil
Niallia sp. Man26
Pathway
nil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
L8T27_013890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_013890
Enzymes [BR:
nil01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
L8T27_013890
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
L8T27_013890
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
AAA_22
AAA
AAA_17
AAA_12
AAA_28
Folliculin_C
NTPase_1
NPHP3_N
TsaE
nSTAND3
T2SSE
AAA_16
Motif
Other DBs
NCBI-ProteinID:
UPO86674
LinkDB
All DBs
Position
1:complement(2730580..2732994)
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AA seq
804 aa
AA seq
DB search
MEEQNSLDLFEEQGKYVKGRHLVTIFHNEDNLYTVLRIRVDETNDSYEDKEAVVTGYLPK
MHENDTYTFFGEFKDHPRFGLQFQVSSFRKEMPQTKQGVITYLSSELFKGIGQKTAENIV
DTLGENAISKILNEPSLLDTVPKLPPDKAKLLYDTLMQNQGLEQAMISLNQYGFGPQLSM
KIYQTYKENTLEVIQSNPYKLVEDVEGIGFGKADDLGFQIGLIGSHPDRIKAGCLYVLEL
GSSQEGHVYLEAEYVLNRVKDLLEENKQEQVDFSAIADQIVLLQEEKKIIVEDKKIFLPS
LYYSEKGLVRHIKRVMEQQEYEDQFPESEFLLALGNLEDRLGVQYAPSQREAIQTALMAP
MLMLTGGPGTGKTTVIKGIVELYGELHGCSLDPKDYKKEEPFPFILAAPTGRAAKRMTES
TGLPAVTIHRLLGWNGSGGFDKDEENPLEGKIIIVDETSMVDIWLAFQLFKALPANIQVI
LVGDEDQLPSVGPGQVLKDLLASSCIPTVRLSDIYRQSEGSSIIELAHEIKDGRLPSNLT
QQQTDRSFIKCASGQIAQAIEKVVLNAKKKGYAPMDIQVLAPMYRGPAGIDRLNVILQEI
LNPNPDGTRKELKFGDVKYRIGDKVLQLVNQPENNVYNGDMGEIVSIFYAKENTEKQDMV
IVSFDGIEATYTRQDLNQITHAYCCSVHKSQGSEFPIVIMPIVKSYYRMLRRNLIYTGIT
RSKQFLILLGEVDAMEIGVGRNDELNRQTSLQEKLKEVFSQSDADIEAAEEDVSLFYSDR
IMEIDPLIGMENVTPYDFMPAQES
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
ttggaagagcaaaattcactggatcttttcgaggagcagggtaagtatgtgaaggggcgc
catcttgtcacgatatttcacaacgaagataatctttataccgtgctcaggataagggta
gatgaaacgaatgacagctatgaagataaggaagccgttgtcacaggatatttgccgaag
atgcatgaaaatgatacatatacattctttggtgaatttaaagaccatccccgctttgga
ctccaattccaggtctcctctttccgaaaagagatgccgcagacaaaacaaggggttatc
acctatctgtctagtgagctatttaaaggaatcggccagaaaacagcagagaacatcgtg
gacactttaggggaaaatgccatctctaaaattttgaatgaaccatctttgcttgatact
gttcccaaacttcctccagacaaggcgaagcttctttatgatacgctcatgcagaatcaa
gggctggagcaggcgatgatatcgttgaatcagtatggtttcgggccgcagctatccatg
aaaatttaccagacttataaggaaaacacattggaggttatccagtccaacccttataag
cttgtagaggatgtagaaggaatcggttttggtaaagcagatgacttaggctttcagatt
ggcctgattggcagccatcctgacagaattaaagcaggctgcctctatgtgctcgagctt
ggcagcagccaggagggacatgtctacctggaagcagaatatgtgctgaacagagtaaag
gatcttctcgaggaaaataaacaggagcaagtagacttttcagctattgcagaccagatt
gtcttgcttcaggaagaaaagaaaatcatcgtcgaagataagaagattttcctgccttcc
ctttattactcagaaaaaggccttgtccggcatattaaaagagtgatggaacagcaggaa
tacgaagatcagtttccagaatcggaatttttgcttgcactcggaaatttggaagacagg
cttggagttcaatatgcaccatcacaaagggaagccatccaaacagcactgatggcgccg
atgcttatgctgacaggcggaccggggacaggaaaaaccacggttataaaagggattgta
gagctttatggtgaactgcatggctgcagccttgatccgaaggattacaaaaaggaagaa
ccttttccttttattttagcggctcccacaggaagagcggctaaaaggatgacagaatcg
actggtttacctgctgtcaccattcatcgtctgttaggctggaacggaagcggcggtttt
gacaaggacgaggagaatcctcttgaaggaaaaatcattattgttgatgaaacctccatg
gttgatatttggctagcttttcagctgtttaaagcattgccagccaatattcaagtcatt
cttgtcggagatgaagaccagcttccgtctgttggaccaggccaggtgctgaaggatttg
ctggcatcaagctgcattccgacagtccggctttctgatatttacaggcagagtgaaggt
tcttctatcattgaacttgctcatgagataaaggacggcagattgccaagtaatttaact
cagcagcaaacagacaggtccttcattaaatgtgcctctggacaaatagcacaggctatt
gagaaggttgtcctcaacgcgaagaaaaagggctatgcgccaatggatattcaagttctg
gcaccgatgtacagaggccctgcaggaatagaccggctcaatgtcattctccaggaaata
ttgaacccaaatccagatggaacacgtaaggaattgaagttcggcgatgttaaataccga
attggcgataaggtgctgcaactcgttaatcagccagaaaacaatgtctataatggagat
atgggagaaattgtatccatcttttatgcaaaggaaaatacagaaaaacaagacatggtt
attgtctccttcgatggaattgaagcaacttatactaggcaggatttaaatcaaattacc
catgcttattgctgttctgttcataagtcccaaggtagtgaatttccaattgttattatg
ccgattgtaaaaagctactataggatgctgcggagaaacttaatatataccggcattaca
agaagtaaacaatttttaatattgcttggcgaagtggatgcgatggaaataggggtaggc
cgaaatgatgagctgaaccgccaaacttccctgcaggaaaagctgaaagaagtcttttcg
caaagtgatgcagatatcgaggcagcagaagaagatgtttccttgttttacagtgatcgg
ataatggaaattgatccgcttatcggaatggagaatgttactccatatgattttatgcca
gctcaagaaagctga
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