Niallia sp. Man26: L8T27_014695
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Entry
L8T27_014695 CDS
T09959
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nil
Niallia sp. Man26
Pathway
nil03030
DNA replication
nil03410
Base excision repair
nil03420
Nucleotide excision repair
nil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8T27_014695 (polA)
03410 Base excision repair
L8T27_014695 (polA)
03420 Nucleotide excision repair
L8T27_014695 (polA)
03440 Homologous recombination
L8T27_014695 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nil03032
]
L8T27_014695 (polA)
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_014695 (polA)
Enzymes [BR:
nil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8T27_014695 (polA)
DNA replication proteins [BR:
nil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
L8T27_014695 (polA)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
L8T27_014695 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L8T27_014695 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_2
HHH_5
HHH
Motif
Other DBs
NCBI-ProteinID:
UPO86828
LinkDB
All DBs
Position
1:complement(2898525..2901149)
Genome browser
AA seq
874 aa
AA seq
DB search
MKKKLILIDGNSIAYRAFFALPLLNNDKGVHTNAVYGFTMMLMKILEDEKPTHMLVAFDA
GKTTFRHKTFSEYKGGRQKTPPELSEQFPYIRELLQSYGIRHYELENYEADDIIGTLSLQ
GEQDGYEVVVISGDKDLTQLSSDKTTVYITRKGITDIESYTPDHIQEKYGLTPDRIIDMK
GLMGDSSDNIPGVPGVGEKTAIKLLKEFETLENLLQSIDQVSGKKLKEKLEEFKDQALMS
KELATITREAPLTVGLGELEFPGMNEEKLRPFFKELGFNSLLDKLGDAPVEEAAELEQIE
FEHVKEITADIFADENVLYVEVLEDNYHYAPIIGISLVNEKGAFYLPIESALESAAFKEW
AEDESKQKTVYDAKRSEVALRHKGIHLKGITFDCLIAAYLADPSASIEDVASVSKKYGFT
NIQSDEAFYGKGAKRKVPEEDMLSDHLVRKTFALSAIQDKMEEELKKNGQEELFYELEMP
LSLVLADMESTGVEVDVERLQKMGAEINDRLKSIEERIYELAGETFNINSPKQLGVILFE
KLGLPVVKKTKTGYSTSADVLEQLASSHDVIKEILEYRQLGKLQSTYIEGLQKVVHNGKI
HTRFNQVLTQTGRLSSIDPNLQNIPIRLEEGRKIRQAFVPSEKDWIIFAADYSQIELRVL
AHIANDEKLIEAFREDHDIHTETAMSVFHVEADEVTSNMRRHAKAVNFGIVYGISDYGLS
QSLSITRKEAGKFIERYLESYPGVKNYMEEIVADAKQQGYVSTLLHRRRYLPDITSRNFN
LRSFAERTAMNTPIQGSAADIIKKAMIEMAKRLESEGLQAKLLLQVHDELIFEAPKNEIE
KLKEIVPDVMENAVELSVPLKVDYSYGDTWFDAK
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaaaaactgattctgattgacgggaacagcattgcatacagggcgttttttgcc
ttgcctctgctgaacaacgacaaaggtgtacatacaaatgcagtttacggttttacaatg
atgctgatgaaaatattggaggatgaaaagccgacacatatgctcgttgcttttgatgct
ggcaaaacaacattccggcataaaaccttcagtgaatataagggaggtcgtcaaaagact
ccgcctgaattatcggagcagtttccatatataagggagctcttacagtcatatggcatc
cgccactatgagctggagaattatgaagcagatgatattatcggtacactttccttgcaa
ggcgaacaggatggatatgaggttgttgttatatcaggtgacaaagacttgactcaactg
agctcagataaaacgactgtttacattacgagaaaagggattacagatattgaatcatat
acgcctgatcatattcaagaaaaatacggcttgactccagaccggattattgacatgaag
ggattaatgggtgatagttctgataatattcctggggtgccaggagtcggagaaaagacg
gcgattaagctgttgaaggaatttgaaacacttgaaaatcttctgcagtccatcgatcaa
gtcagtggtaaaaagctgaaagaaaaactcgaggaattcaaagaccaagcgttaatgagc
aaggagctggccacgattacaagagaggctccgttaactgtaggattaggggaactggaa
tttccgggcatgaacgaagagaagctccgcccatttttcaaggagctcggctttaattct
cttttggacaagcttggagatgcacctgtggaagaagctgcagagctggaacaaattgaa
tttgaacatgtgaaggagattacggcagatatttttgccgacgagaacgtcctgtatgtg
gaagtgttagaagataactatcattatgcgccaattatcggaatctcgttagtgaatgaa
aaaggggcattttatttgccgattgaatcagccctagaatcagcagcctttaaggaatgg
gcagaggatgagtcaaagcagaagacagtgtatgacgcgaaaagatcagaggtagctctc
cgacataagggcattcatttgaaaggcatcacattcgactgtttaattgcggcgtatctt
gcagatccatctgcatccatcgaggatgttgcgtctgtttctaaaaagtacggcttcacg
aatattcaatcggatgaagcgttttatggtaaaggagctaaacgaaaggtgccagaggaa
gacatgctttcagaccatcttgtccgcaaaacatttgccctttctgccattcaggacaaa
atggaagaagagcttaagaagaatggtcaagaggaactattctatgagctggaaatgcca
cttagtcttgtactagcagatatggaatcaacaggagtagaggttgatgtagaaagactt
caaaagatgggtgcagaaatcaatgacaggcttaaaagtattgaagagcgtatttatgaa
ttggctggcgaaacgttcaacatcaattctcctaagcagctgggggttatcctgtttgaa
aagcttggtcttcctgtcgttaaaaagacaaagacaggttattccacttcagcagatgtc
ttagaacagctggcgagctcccatgatgtgattaaggaaattcttgaatacagacagctt
ggaaagcttcagtccacatatattgaaggattgcaaaaagtggttcacaacggcaaaatt
cacactcgctttaatcaggtgttgacacaaacaggccgattgagctccattgatccaaat
ctgcaaaacattccaatcagacttgaggaaggcagaaaaattaggcaagcattcgttcct
tctgagaaggattggattatatttgctgctgactatagccaaattgagcttcgggtgctt
gctcatattgccaatgatgagaagctgattgaggcctttagggaggatcatgatatccat
acagaaacagcaatgtctgttttccatgtggaagcagatgaagtaacctctaatatgaga
agacacgctaaagcagttaactttggcattgtttatggtatcagtgattacggcttatca
cagagcttgagtatcacgagaaaggaagctgggaagtttattgaaagatatttggagagc
tatcctggcgttaagaactatatggaggagattgtggcagacgcaaagcagcaaggctat
gtgtccacattgcttcatagaagaagatacttgcctgatattacaagccgaaacttcaat
ttgcgcagctttgcagaaagaactgcgatgaatacgccaatacagggcagtgcggcagat
attattaaaaaagcgatgattgaaatggcgaagcgtttggaatcagaaggcttgcaagca
aaactgctgctgcaggtgcatgatgaattgatctttgaagcaccaaagaatgaaatcgaa
aagctgaaagaaattgtgccagacgtgatggaaaacgcagtggaacttagtgttccgttg
aaggtggactattcgtatggtgacacatggtttgatgctaagtaa
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