Niallia sp. Man26: L8T27_014775
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Entry
L8T27_014775 CDS
T09959
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nil
Niallia sp. Man26
Pathway
nil03030
DNA replication
nil03430
Mismatch repair
nil03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nil00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L8T27_014775 (dnaE)
03430 Mismatch repair
L8T27_014775 (dnaE)
03440 Homologous recombination
L8T27_014775 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nil03032
]
L8T27_014775 (dnaE)
03400 DNA repair and recombination proteins [BR:
nil03400
]
L8T27_014775 (dnaE)
Enzymes [BR:
nil01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L8T27_014775 (dnaE)
DNA replication proteins [BR:
nil03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L8T27_014775 (dnaE)
DNA repair and recombination proteins [BR:
nil03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L8T27_014775 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Cdc13_OB2
Motif
Other DBs
NCBI-ProteinID:
UPO86843
LinkDB
All DBs
Position
1:complement(2920153..2923515)
Genome browser
AA seq
1120 aa
AA seq
DB search
MSFVHLQVSSAYSLLSSTASVKQLVSAAKERGFSALALTDRNVMYGTAAFYKECIKQNIK
PIIGLTVDIISEKHTDTAFPLVLLAKNGEGFQNLLKLSSAIQTKNKQGIPIRWLKHYADG
LFAFTPGHSGEIEQSLLAEDLEHAKETVALFKSILAPGHFYLSLQKHGIEAETALNKKLK
ELAESSATKLIAVNDVKYTSKGDRFAQSCLNAIKHGITLAEVVQDEWESEERYLKSKQEM
VELFSEEPEALENTWAVASACEFQLGEKVAALPKYPLLAGQTADGYLLDLCEQGLKARYT
NPSKIHMERLRYELDVINRMGYSDYFLIVWDFMKYARDNEILTGPGRGSAAGSMVAYVLF
ITDVDPIKYDLLFERFLNPERITMPDIDIDFPDDKREQVIEYVKNKYGELHVAQIITFGT
LAAKAALRDVGRVFGLSMKELEQLSKSVPSKLGITLEQSLRESKQLQAFIAESPKNKQIF
ETACKIEGLPRHASTHAAGVVLSEEPLVQIVPIQGGNEEVYLTQYSMEHLEELGLLKMDF
LGLRNLSLLQSIMETIQRQTHRRIAIKEIPLDDSAVFELLSQGETTGIFQLESDGMRNVL
KKLKPTEFEDIVAVNALYRPGPMENIPLYINRKHGKEEIDYYHPDLQVILEKTYGVIVYQ
EQIMQIASKMAGFTLGEADLLRRAVSKKQRDVLASERVHFVNGALAKGYTQKAADEIYEL
IVRFADYGFNRSHAVAYSMIAYQLAYLKANYPLFFMSSLLTSAVGNEGKIMQYIQESKQM
GIKVLPPSINKSHFAFMVEGSEILYSLAAVKGVGAAVLKEVFRARRQKRFEDLFDFCLRT
SPKIVNRKIIEAFIYAGCFDEFGEDRATLLATIDVAIQHAQLVHPDGMEQDDLFGEEGFF
FKPKYVQVDPMNAEDKLSLEKKVLGLYLSNHPVSIYEQYKQLLRSNHLGEMAPGGKYRTI
VYITDWKAIRTKKGEPMAFLSISDQSGEMEAVAFPAAYKKLQNLIQTEKIVFMEGKVDER
NGNKQFVIQDAANVLEIVQSQKANKHKLFIKIVQENETDEIKGRLLDIINNYKGATPVII
HYVQSGKTIQLNEDFFIDPVKECLQRLEELLGTNHVILSD
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgttcatctgcaagtatcaagcgcgtacagcttgctgtcgagtacagcgtcc
gttaaacagcttgtttccgctgcgaaggaaaggggattcagtgcgcttgccttgaccgat
cgcaatgttatgtatgggacggcagctttttataaggaatgtatcaagcagaatattaaa
cctattatcggtttaactgtcgatattatcagtgaaaagcacacagatacggccttccct
ctagtgctgctggcaaaaaacggggaaggcttccaaaacctgttaaaattatcaagtgcc
atccagactaaaaacaaacaaggcattccaatcagatggctaaagcattatgctgacggg
ctgtttgcgtttactccaggacatagtggtgaaatagagcagtctctgctggcagaagac
ctagagcacgctaaagaaacagtggctttatttaagagcatactcgctcccggtcatttt
tatttatcgctacaaaagcacgggatagaagcagagacagccttgaataaaaagctaaaa
gaattagcagagtcttcagcaacaaaactgattgctgtaaatgatgtcaagtatacaagc
aagggagaccgttttgcgcaaagctgtttgaatgcaattaaacatggcatcaccttagct
gaggtagtacaggatgaatgggaatctgaagagcgttatttgaaaagcaagcaggagatg
gtagagctgttcagcgaggagccggaggcgttggagaatacttgggcggttgcttcagca
tgtgaattccagcttggagagaaggtcgctgcattgccaaaataccctcttttagccgga
caaacagccgacgggtatttactggacttatgcgagcaagggctgaaagctagatataca
aatccttcgaaaatacatatggaacgccttcgttatgaactggatgtaatcaaccggatg
ggctacagcgattactttctgattgtctgggactttatgaaatatgcaagagacaacgaa
atcctaacagggcctggaaggggttctgctgcaggctcgatggttgcatatgtgttgttc
attacagacgttgatccgataaaatatgacttgctgtttgagcgcttcttgaatcctgaa
cggattacgatgccagatatcgatattgatttcccggatgacaagcgggaacaggttatt
gaatatgttaaaaacaaatatggggagctgcatgtagcacaaattattacatttgggaca
cttgcagcaaaagctgccttaagagatgttggcagggtttttgggttatcgatgaaagag
ttggagcagctttcaaaatcagtgccctcgaagcttggaatcacattggagcagtccctg
cgggaatcaaagcagcttcaagcatttattgcggaatctccgaaaaataaacaaatcttt
gaaacagcttgcaaaatagaagggctgccgcgacatgcgtctacacatgctgctggggta
gtgttaagcgaagagccccttgtacagattgtcccgattcaaggaggcaatgaagaggtt
tatttaacacagtacagcatggagcatttggaggaactgggattattaaagatggatttt
ctcgggttaaggaatttatccttgctgcaatctatcatggaaaccattcagcgccaaaca
catagaagaatcgcaattaaagaaattcctttagatgattcagcagtgtttgaactcttg
agccaaggagaaacaacaggaatatttcagttggaatctgacggaatgagaaatgtcttg
aaaaagctaaaaccaacagagtttgaagacatagtagctgttaatgccctttaccgtccc
ggtccaatggagaacatcccgttatatattaacaggaagcacggcaaagaagaaattgat
tattaccaccctgatttacaggtaatcttagagaaaacatacggggtaattgtttaccaa
gagcagattatgcaaattgcttctaaaatggcaggttttactctaggcgaagcagatttg
cttcgcagagcagtgagcaaaaagcagcgggatgtgctagcgtcagaacgggttcatttt
gtaaatggtgcgttggcaaagggatatacacaaaaggccgcagatgaaatttatgaactg
attgtccgatttgcagattacgggtttaataggagtcacgcagtagcatacagtatgatt
gcctaccagcttgcctacttaaaggcgaactatccgctgtttttcatgtcatctcttctg
acgtcagcagtcggaaatgaagggaaaattatgcagtatatccaggaatcaaagcaaatg
ggtattaaggttttgcctccttctattaataagagtcatttcgcctttatggtcgaaggc
agtgagattttatacagcttagcggctgttaaaggggtcggagcagctgttttgaaagaa
gtgttccgtgcgagaaggcaaaaaagatttgaggatctttttgatttctgtttgcgaacc
tctccaaagatagtaaacagaaaaatcatagaagcctttatatacgcaggctgctttgac
gaatttggagaggacagggcaacattgcttgcgaccattgatgtagcaattcagcatgct
caacttgttcatccagatggcatggaacaagatgatctgttcggtgaagaaggcttcttc
tttaagccgaaatatgtccaagtagatccgatgaacgcagaggataagctttcattagag
aaaaaggttctcggactctatctatctaatcacccagtttccatatatgagcaatacaag
caattgcttcgctctaatcatttaggtgagatggctccaggcggaaaatacaggactata
gtatatataacggactggaaagcaatccgaacaaaaaaaggggaaccgatggcgttcctt
tccataagtgaccagagcggggaaatggaggcagtcgcttttccggcagcttataaaaaa
ctgcaaaacttgattcaaacggaaaaaattgtatttatggaagggaaagttgatgaacgg
aacggaaacaaacaatttgttatccaagatgctgcaaatgttttggaaatcgtccaatca
cagaaagcaaacaaacataaattatttattaagattgtccaggaaaatgaaacagatgaa
ataaaaggaagactattggacatcattaacaattataaaggggctacccctgttattatc
cactatgtgcaatctggaaagacaattcagctgaatgaagatttcttcatcgatcctgta
aaggaatgccttcaaaggcttgaagaattgcttggtacaaatcacgtaatcttgtctgat
taa
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