Candidatus Nitrotoga sp. AM1P: W01_02030
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Entry
W01_02030 CDS
T06613
Name
(GenBank) AMP-dependent synthetase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00061
Fatty acid biosynthesis
nim00071
Fatty acid degradation
nim01100
Metabolic pathways
nim01212
Fatty acid metabolism
nim02024
Quorum sensing
nim04146
Peroxisome
Module
nim_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
W01_02030
00071 Fatty acid degradation
W01_02030
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
W01_02030
09145 Cellular community - prokaryotes
02024 Quorum sensing
W01_02030
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
nim01004
]
W01_02030
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nim04147
]
W01_02030
Enzymes [BR:
nim01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
W01_02030
Lipid biosynthesis proteins [BR:
nim01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
W01_02030
Exosome [BR:
nim04147
]
Exosomal proteins
Exosomal proteins of breast milk
W01_02030
Exosomal proteins of breast cancer cells
W01_02030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BBJ22276
UniProt:
A0A455XBM5
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All DBs
Position
231566..233371
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AA seq
601 aa
AA seq
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MPDNQDHIITPEEAVTLHGLFVERVKRTPDAIAYRYFDTNDNTWLSMTWAQARDQTARWQ
AALMREGLAAGDRVAIMLRNCPQWVLFDQAALSLGLVVVPLYTEDRQDSVAYIINDAGVK
VLLFENSEQWQALRSVCAQLPCIQRMISLDRVVGHNEARLLCVEEWLPAHAVLIEERVRE
RDALATIMYTSGTTGRPKGVMLSHRNILFDAHAALQTCPVSGTDTMLSFLPLSHAFERTV
GYYICVMAGVTVAYARSVQLLSEDLQIIRPTILVSVPRIFERVYGAISAKLEEVSPLRRK
LFALAVNIGWHRFEHEQGRAGWNLSLLLWPLLNHLVASKVMARLGGRLRLTLCGGAALQP
EISRVFIALGLPILQGYGLTETSPIVCANRLNSNFPSSVGLPLPGVEVRIDEQGALLVKG
QNVMLGYWNNAEATRAMIDADGWLSSGDLASISELGHITITGRLKEIIVMSNGEKISPAD
MEQAILRDRLFDLVMVHGEGRPYLTVLTVVNAAGWAHLAQEIGVRADRPESLHDPRIEQQ
ILQRIADQIKEFPGYAKVHRVLLLTEPWSVDNGLMTPTLKVKRGSVVERFAKEIEQLYQG
H
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccggacaaccaagaccacattatcacgccggaagaggcagtaaccttgcatgggttg
tttgtcgagcgtgtaaaacgcacgcctgatgctattgcttaccgttatttcgatacgaac
gacaatacttggttgtcgatgacatgggcgcaggcgcgcgatcaaacggcgcgctggcag
gcggcgctgatgcgtgaaggattagcagcgggtgaccgagtcgccatcatgttgcgcaac
tgcccgcaatgggtattgtttgatcaggcggcgttatcgctcggccttgtggtggtgccg
ctatacactgaggacaggcaggatagcgtggcctatatcatcaacgatgcgggcgtgaag
gtgctgctgttcgagaattcagaacaatggcaagcgttgcgtagcgtgtgcgcacagctt
ccatgcatacagcgcatgatcagtctggatagggtagtcggacataatgaagcacggttg
ctatgtgtagaggagtggttgcccgcgcatgcagttttgattgaagaacgggtgcgcgag
cgcgatgcgctggccacgatcatgtacacctcgggtactacgggtcgccccaaaggagtg
atgctgtcgcaccgcaatattttgtttgacgcccatgcggctttgcagacctgtcccgtt
tctggaacggacactatgctgtcttttttgccgctttctcatgcctttgaacgtacggtg
ggttattacatctgcgtgatggctggcgtcacggttgcctatgcgcgttccgtccagctg
ttgtcagaggatttacaaattattcgcccaactattttggtttctgtgcctcgtattttt
gagcgtgtgtacggggcgattagcgccaagctggaggaggtatcgccgttgcggcgcaaa
ctatttgctttagcggttaatataggttggcaccgctttgagcatgaacaggggcgtgct
ggatggaatttgtctttattactatggccgttgcttaatcacttagtagccagcaaggta
atggcgcgtttaggtggacgacttcgcctgactttgtgtgggggagcggctttgcagccg
gaaatctcacgtgtatttattgcactcggcttgcccattttgcaaggctatggcctgact
gagaccagcccgattgtttgcgctaatcgcttgaatagcaattttccgtccagtgttggg
cttcccctaccgggggtagaggtgcgcatcgacgagcagggtgcgttactggtgaaaggg
cagaatgtgatgttaggttattggaataatgccgaggcgacacgcgccatgatagatgcg
gatggctggctgagcagtggcgatcttgcctctattagcgaattaggacatatcaccatc
acggggcgtctgaaggaaattatcgtgatgtctaacggcgagaaaatttctccggcggac
atggaacaggccattctgcgcgaccgtttgttcgatctggtgatggtgcatggcgagggg
cgtccctatctgactgtgctgacagtagtgaatgcggcaggctgggcacacttagcgcaa
gagatcggggtgcgtgcggacaggccggaatcgttgcatgaccctcgtatcgagcaacag
atattgcagcgtatcgctgatcagataaaggagtttccaggttatgccaaggtacaccgg
gtattactgttgaccgagccgtggagtgttgataacggactgatgacgcccaccctgaag
gttaaacgtggatctgtggtggagcgctttgcaaaagaaattgaacagctttatcaagga
cattga
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