Candidatus Nitrotoga sp. AM1P: W01_02050
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Entry
W01_02050 CDS
T06613
Symbol
fadB_acbP
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K07516
3-hydroxyacyl-CoA dehydrogenase [EC:
1.1.1.35
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00071
Fatty acid degradation
nim00362
Benzoate degradation
nim00650
Butanoate metabolism
nim01100
Metabolic pathways
nim01120
Microbial metabolism in diverse environments
nim01200
Carbon metabolism
nim01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
W01_02050 (fadB_acbP)
09103 Lipid metabolism
00071 Fatty acid degradation
W01_02050 (fadB_acbP)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
W01_02050 (fadB_acbP)
Enzymes [BR:
nim01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
W01_02050 (fadB_acbP)
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
3HCDH
ECH_1
ECH_2
NAD_binding_2
Shikimate_DH
DAO
Clathrin_H_link
Motif
Other DBs
NCBI-ProteinID:
BBJ22278
UniProt:
A0A455X0D9
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Position
233887..236373
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AA seq
828 aa
AA seq
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MPKNFIIRKVAVLGAGVMGAQIAAHLINANVETLLFELPAKEGDLNGNVTKALEGLKKLE
PSPLASPAKLAYLQPANYEQHLELLRGCDLVIEAIAERIDWKSDLYRKVAPYLGADCIFA
SNTSGLSINELAQAFPEAQRHRFCGIHFFNPPRYMHLVELIPCAGTDAVLLDRLEEFLVS
TLGKGVVRAKDTPNFIANRIGVFSLLATLHHARRLGLNFDTVDALTGRYLGRPKSATFRT
LDVVGLDVFARVVDTMRNNLADDPWHAYFALPGWLDKLIAEGALGQKTKRGVYQKVGNKI
HVFDLGLQTYRLSEDKLDDAVKDILRERDWAKKLAALHTSTRPQAQFLWAVFCDLFHYCA
VQLEGIANNARDLDFAVRWGFGWDSGPFEIWQTTGWQKVVGWVNEDIAAGRTMSSAPLPD
WVTDATRNEVHSAQGSYSPGSNQYQARSKLPVYDRQEFPDRLLGEVMQYGETIFETEAVR
MWHTDNDIAILSFKTKMHIISSELLDDILRALDEAEENWLALIIWQTEPPFSAGANLLQL
MQGVQQVDEEQSGGFFGKFKGAVQRVKYTVAGGGGLSEIVNAATGNVLRVEDVIAKFQRV
SQRLKYAQVPTVAAVDGLALGGGCEISIHCTRIVAVLESYIGLVETGVGLLPSGGGCKEM
TQRAAAEAKGGDIFPFLRRYFQNIAMGEVSKSAELAREMGYLRASDRIVMNHFELLHVAK
QEALALVATAYRPPLIQRQIPVAGRTGIASFKASMVNMLEGGFISEHDYAIGSRVAEVMC
GGDVEVGSMVDEQWLLDLERRNFLELLAMDKTQERIEYMLRHSKPLRN
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcctaagaattttattatacgtaaggtcgctgtattgggagcaggggtaatgggcgcg
cagattgccgcgcatttgatcaacgccaatgtggaaacgctgctattcgagttgcctgct
aaagagggtgatcttaatggcaacgtaaccaaagcgctggaaggcttgaagaagctcgaa
cccagtccattagcatcccctgccaagctggcctatctccagcctgcaaattacgagcag
cacctagaattgctgcgcggttgtgatcttgtgattgaggcgattgccgagcgcatcgac
tggaagtcagatctttaccgcaaagtcgccccttatcttggcgcagactgcatttttgcc
agcaacacttccgggctgtctatcaacgaattggctcaggcgtttccagaagcgcagcgc
catcgattctgcggcattcatttttttaacccgccgcgctacatgcatttggtcgaactg
attccctgcgctggcactgacgctgtgctgctggacagactggaggagtttcttgtctcc
acgctgggcaaaggcgtggtacgggccaaggacacgcccaactttatcgccaaccgcatc
ggtgtattttctttactggccacgctgcatcatgcacgccggctggggctgaacttcgat
accgtggatgctttaaccggccgctatctggggcgccccaagagcgctacttttcgcact
ttggacgtggttgggctggatgtattcgcacgcgtggtcgacaccatgcgcaataatctt
gcagacgatccctggcacgcctattttgcgctgccgggctggttggacaagctgatagcg
gagggcgcgctagggcagaaaaccaaacgcggtgtgtatcagaaagtcggtaataaaatt
catgttttcgatttgggtttgcagacttatcgcttgtcggaagataagttggatgatgcg
gtaaaggacatactacgcgaacgtgattgggcgaaaaagcttgctgccctgcataccagc
acgcgtccacaagcgcaattcctgtgggcggtgttttgtgatttatttcactattgtgcg
gtacagctggaaggtatcgcgaacaatgcgcgcgatctggattttgccgtgcgctggggg
ttcggctgggacagtgggccgtttgaaatctggcagacgacaggctggcaaaaggtagtc
ggttgggttaacgaagatatcgcggcgggcaggaccatgtcgtccgcacctctgccagac
tgggtgactgatgcaacccgtaatgaggtgcatagtgcgcagggctcatactcgccgggc
agcaatcagtatcaagcacgctcgaagttaccggtgtacgaccggcaggagtttccagac
cgattgctgggcgaggtaatgcaatatggcgaaacgatttttgagaccgaagcggtacgc
atgtggcacaccgataacgatatcgccatcctgagttttaaaaccaagatgcatatcatc
agcagtgaattgctggacgatattttgcgcgcgctggacgaagccgaggaaaactggctt
gcactcattatttggcagactgaaccaccattctctgccggtgccaatttattgcaattg
atgcaaggggtacagcaagttgatgaagaacaatccggtgggtttttcggcaagtttaaa
ggcgcggtgcagcgcgtcaaatataccgtggcgggcggtggcgggctaagtgaaatcgtc
aatgcggcaaccggcaatgtcctccgagtagaagacgtaatcgccaaattccagcgggtg
tcgcagcgcctgaaatatgcgcaggtgcctactgtcgcggcggtagacggcctcgcgctg
ggcggcggctgcgaaatttcgattcattgcacgcgtattgttgctgtgttggaaagttat
atcgggctggtagaaacgggcgttggcctgctgccctctggaggcggctgcaaggaaatg
acgcaacgcgcggcggcggaagcaaaaggcggcgatatttttccgtttctacgccgttat
tttcagaatatcgccatgggcgaagtatccaagagcgcagagttggcgcgcgagatgggc
tatttgcgagcctcggatcgcatcgtgatgaaccacttcgaattgctgcatgtggccaag
caagaagcattggcgctggtagccacggcctatcgcccgccgctgattcagcgtcaaatt
ccggtagcaggcaggacaggcattgcttcattcaaagcgtctatggtgaacatgctcgaa
ggaggtttcatctcggagcatgattacgctattggcagccgtgtggccgaggtaatgtgt
ggtggtgatgtagaagtcggcagcatggtcgatgagcaatggctgcttgatctggagcgg
cgcaatttccttgagttgctggcgatggacaagacgcaggaacgcattgagtacatgctg
aggcatagcaaaccattgcggaattaa
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