Candidatus Nitrotoga sp. AM1P: W01_03400
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Entry
W01_03400 CDS
T06613
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nim03009
]
W01_03400 (rimO)
Enzymes [BR:
nim01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
W01_03400 (rimO)
Ribosome biogenesis [BR:
nim03009
]
Prokaryotic type
ribosomal protein modification factors
W01_03400 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
TPP_enzyme_M
YnfU
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
BBJ22413
UniProt:
A0A455XA37
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All DBs
Position
390124..391446
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AA seq
440 aa
AA seq
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MSKQNTAPRVGFVSLGCPKATVDSEHILTRLRTEGYIISPNYVDSDLVVVNTCGFIDSAV
AESLEAIGEALAENGKVIVTGCLGAKGNVVKETHPKVLAVTGPHATDAVMEAIHAHLPKL
HDPYSDLVPPQGIRLTPRHYAYVKISEGCNHRCTFCIIPSMRGDLVSRPVGDVMQEAQNL
VNAGVKELLVISQDTSAYGVDVKYRTGFWGGRPIRTRMTELVQAMGELGVWVRLHYVYPY
PHVDEVIPLMAQGKILPYLDIPFQHANARILKLMKRPASSENVLTRIQQWRKICPDITLR
STFIVGFPGETGEEFEELLDFLEMAQLDRVGAFMYSPVEGAVANNLPDHIPLEIQQERLG
RLMQLQEEISGERLACKKGKTMQVLVDEVDEEGAIARSSADAPEIDGLVYISNGQVLKVG
DFVNVRITDSDVHDLWAEMV
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacaaaacacagcgccacgcgtcggcttcgtatctctcggttgtcctaaggcg
acggtggattccgagcatattcttactcgtttacgcactgagggttacattatttctccc
aactatgtggattccgatctggtggtagttaacacttgcggtttcatcgacagtgcggtg
gcagaatcgcttgaagccatcggcgaagcgctggctgaaaatggcaaagttattgttact
ggctgcttgggtgcaaaaggcaatgtagtgaaagaaacgcatccgaaagtattggcggtc
accggtccgcatgcgacagatgcggtgatggaagccatccatgcccatttacccaagttg
catgatccttacagcgatctggtcccgccgcaaggcatacggctgacacccagacattat
gcttatgtgaaaatttcagagggctgtaaccatcgctgtactttttgtatcattcccagc
atgcgcggcgatctggtgagccgtccggtaggtgacgtgatgcaggaggcgcagaactta
gtgaacgcaggcgtgaaagaattgctggtaatctcgcaagataccagcgcctatggcgtg
gatgtgaaataccgcacgggtttctggggcggccggccgatcagaacgcgtatgaccgag
ctcgtgcaggcaatgggcgaactaggcgtatgggtgcgattacattacgtttatccttac
ccacatgtagatgaagtcattccgctgatggcgcagggaaaaattctgccctatttggat
atcccttttcagcacgccaatgcacgcattcttaaattaatgaaacgtcccgccagcagt
gaaaacgtacttacacgcattcagcaatggcgaaaaatctgtccggacattactttacgc
agtactttcatcgtcggtttccccggcgaaacaggagaagaatttgaagagctgctcgat
tttctcgaaatggctcaactggatcgtgtcggcgcatttatgtattcgcctgtggaaggt
gctgtggccaataatttaccggatcacatcccacttgaaatccagcaagaacgtttgggc
cgtttgatgcaattgcaggaagaaatcagtggcgaacgccttgcatgtaaaaaaggtaag
accatgcaggtattggtggatgaagtggacgaggagggtgcaattgcacgtagttcagct
gatgcaccagagattgatggcctggtttatattagtaatggccaggtattaaaggtaggt
gattttgtgaatgtccgaataactgactctgatgttcatgatctgtgggcggaaatggtt
taa
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