Candidatus Nitrotoga sp. AM1P: W01_03460
Help
Entry
W01_03460 CDS
T06613
Symbol
rbcR
Name
(GenBank) RuBisCO operon transcriptional regulator
KO
K21703
LysR family transcriptional regulator, low CO2-responsive transcriptional regulator
Organism
nim
Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nim03000
]
W01_03460 (rbcR)
Transcription factors [BR:
nim03000
]
Prokaryotic type
Helix-turn-helix
LysR family
W01_03460 (rbcR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
PBP_like
Death_EDAR
SBP_bac_11
HTH_30
HTH_24
HTH_5
Motif
Other DBs
NCBI-ProteinID:
BBJ22419
UniProt:
A0A455X202
LinkDB
All DBs
Position
396122..397078
Genome browser
AA seq
318 aa
AA seq
DB search
MLTISINYNLTMLHLTIRQLKIFDAVARHLSHSRAAKELYLSQPAVSMQIKQLEQSVGLP
LFDRVGKQIHLTNAGQEMLHYTRNIAQQLEEMNAMFSEMKGLEHGRLNISAVSTASYFMP
QLLAKFIQQHPKISVSLHVANRDAVIKLLADNSADLAIMGQPPEGTDMLSQPFMQNPLVV
IAALNHPLTKVRNIKPKQLAQETFLLREQGSGTRGVVERYFASHHLKLPTHMEMDTNEAI
KQSVQAGMGLGIISMHGIELELEMKRLQVLNVDHFPIMRHWHIVHLKNKRLSTAAHAFNQ
FLLNEAESLASPTPFKRN
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgttaactataagtattaattataatctgacgatgttacatttaactatccgccaactt
aaaattttcgatgccgtagcacggcatttgagtcactcacgcgcggccaaggaattgtat
ctcagccagccagcagtctccatgcaaatcaagcaacttgaacagagtgtcggtttacct
ctatttgaccgagtgggcaagcaaatacacctgaccaacgcaggccaggaaatgctgcat
tacactcgcaacattgcgcaacagcttgaggaaatgaacgccatgtttagcgaaatgaaa
gggttggaacatggtcgcttgaatatctccgcagtcagtacggccagttattttatgcct
caattattggcaaaatttatccagcaacaccctaagattagcgtaagcctgcatgttgcc
aatcgtgatgcggtaataaaattgctcgctgataatagcgccgatctcgccattatgggt
cagccaccggaaggtacggatatgctatcgcagccgtttatgcaaaacccgctggttgtt
atcgctgcactcaaccaccctttgaccaaagtgcgtaacatcaagcccaagcaattggca
caagaaacttttttgctgcgcgagcaagggtcgggtacgcgcggagtggtggaacgatat
ttcgccagtcaccatttgaaattgcctacgcatatggaaatggatactaatgaagcaatc
aaacaatcggtgcaagccggtatgggattaggcatcatctccatgcatggcatcgaactg
gaactggaaatgaaacgtctgcaagtactgaatgtggatcattttcccatcatgcgtcac
tggcatatcgtccatctgaagaataaacgtctttccaccgcagcgcatgcattcaatcag
tttttactgaatgaagcagagagtctggcatcacccactccattcaaacgaaattga
DBGET
integrated database retrieval system
