Candidatus Nitrotoga sp. AM1P: W01_08890
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Entry
W01_08890 CDS
T06613
Symbol
fecI_2
Name
(GenBank) RNA polymerase, sigma 19 factor KpLE2 phage-like element
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W01_08890 (fecI_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nim03021
]
W01_08890 (fecI_2)
Transcription machinery [BR:
nim03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
W01_08890 (fecI_2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r4
Sigma70_r2
PhyR_sigma-like
HTH_23
Sigma70_ECF
HTH_11
HTH_24
HTH_28
HTH_31
HTH_40
HTH_3
Rv2175c_wHTH
HTH_20
TnsD
HVO_A0261_N
HTH_10
Sigma70_r3
Motif
Other DBs
NCBI-ProteinID:
BBJ22962
LinkDB
All DBs
Position
1035884..1036390
Genome browser
AA seq
168 aa
AA seq
DB search
MATADTISQEIESLYSNHHGWLCGWLRKKLEAHCDAVDFAHDTFLRILTSRDLFCIREPR
AYLATVAGGLVAHHYRRRAIETAYLDALTSLPEPETPSPEYSAILLETLIEIDQLLDNLP
LKARRAFLLAQLEGLTYAEIAQQLGVSVSMIKQYMLRATQQCYFSLSF
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggcagataccatttctcaggaaattgaatcactctacagtaatcatcatggt
tggctgtgtgggtggttgcgcaaaaaattggaggcacactgtgacgcggttgattttgca
cacgacactttcctgcgtattcttacgtcacgcgacctattttgtatccgcgaaccgcgc
gcttacctcgccacggttgcaggcggattagtcgcacatcattatcgtcggcgtgccatt
gaaacagcctatcttgatgcactgaccagcttgccagaaccggaaactccttctccagaa
tacagcgctattctgttggaaacattaatcgagattgatcaattgctcgacaatttgccc
ctgaaagcacgccgagcgttcttgctggcgcaactcgaaggtttgacttatgcggaaatt
gctcagcaattgggtgtgtccgtcagcatgattaaacaatatatgctgcgtgctacacag
caatgttatttttcactctcgttctga
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