Candidatus Nitrotoga sp. AM1P: W01_09640
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Entry
W01_09640 CDS
T06613
Symbol
uvrB
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
W01_09640 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nim03400
]
W01_09640 (uvrB)
DNA repair and recombination proteins [BR:
nim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W01_09640 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
W01_09640 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
UVR
ResIII
DEAD
AAA_30
Kinesin
AAA_18
AAA_22
DALR_1
Motif
Other DBs
NCBI-ProteinID:
BBJ23037
LinkDB
All DBs
Position
complement(1117386..1119407)
Genome browser
AA seq
673 aa
AA seq
DB search
MIKTFPNSPYFLHQPFEPAGDQPTAIAQLVEGVNEGLVFQTLLGVTGSGKTFTMANVIAQ
SGRPAIIMAPNKTLAAQLYSEMRDFFPENAVEYFVSYYDYYQPEAYVPSRDMFIEKDSSI
NEQIEQMRLSATKSLLERQDVVIVATVSAIYGIGDPVDYHGMVLHLREHEKLVRQDAIKR
LTEMQYERNDVDFSHGHFRVRGDVIDIFPAENSEHALRLTMFDDEVESLSLFDPLTGHIL
SRVPRFTVYPSSHYVTPRSTTLKAIETIKVELAERIDFFQREHKLVEAQRIEQRTRHDLE
MLNEIGFCKGIENYSRHLSGRKAGEPPPTLIDYLPPNALMFIDESHVTIPQIGGMYKGDR
ARKENLVNYGFRMPSALDNRPLRFDEFERVMRQSIFVSATPAVFEAEHTGQVVEQLVRPT
GLVDPQIEVRPATHQVDDLMSEVNLRTAKGERVLVTTLTKRMSEDLTEYFSEHGIKVRYL
HSDIETVERVEIIRDLRLGMFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERALI
QTIGRAARHINGSAILYADKVTNSMRRAIDETERRRNKQLLHNELHGITPQGVQKRIKDI
IEGSYEPDAARKQLKIEQDQEKYLAMSERDLAKEIKRLEKEMLQAAKNLEFERASELRDQ
LKKLRESVFMSPL
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
gtgattaagacttttcctaatagcccctattttttgcatcagccttttgaaccagcgggt
gatcagcccactgcgattgcgcaattggtcgagggagtaaatgaggggttagtttttcaa
acgctgttgggtgtgacgggctctggtaaaacattcactatggcgaatgtcatcgcccaa
tcggggcgaccagccatcatcatggcaccaaataagaccttggcggcacagttgtattct
gaaatgcgcgatttttttcctgagaacgcagtggagtacttcgtttcttattatgattac
taccagccagaggcgtatgttccgtcgcgtgatatgtttatcgaaaaggattccagcata
aatgagcagatcgagcagatgcgcctgtcggccaccaaatcactgttggagcgacaggac
gtggtgattgtggccaccgtttcggccatttatggaatcggcgatccggtagattatcac
ggcatggttctacacctgcgcgagcatgaaaaattagtacggcaggacgcaatcaagcgt
cttacagagatgcagtatgagcgcaatgatgtggatttttcgcatgggcattttcgagtg
cgcggcgatgtaatcgacatctttccggcagaaaatagcgaacatgcattacgactgacg
atgtttgacgatgaagtggaaagcttgtcgctatttgatccacttaccggccatattttg
agccgcgtgccgcgttttaccgtgtacccgtccagccactatgtcacgccgcgtagcacc
acattaaaggccatagaaaccattaaagttgagctggctgagcgcatagatttttttcag
cgcgaacataaattggtggaagcgcagcgtatcgaacagcgtacgcgtcacgatctggaa
atgctgaatgaaatcggtttctgcaaaggcatcgaaaattattcgcgccatctgtctgga
cgcaaggcgggagagccaccacctacactgattgattatcttccgcccaatgcgttgatg
tttatagatgaaagccacgttaccattccgcagatcggcggcatgtacaaaggtgatcga
gcgcgtaaggaaaatctggtcaactacggtttcagaatgccatccgcgctggataaccgt
ccgctacgttttgacgagtttgaacgcgtaatgcgtcaatccatattcgtttctgcgaca
ccggctgtttttgaggcagagcataccgggcaagtggttgaacaattggtgcgtccgact
ggattggttgatcctcaaattgaagtgaggccggctacgcaccaagttgatgatttgatg
tctgaggttaatctgcgcacggctaagggtgagcgagtgctggtcaccacactgaccaag
cgcatgtcggaagatttgaccgaatatttttccgagcacggtattaaagtgcgttacctg
cattcagatattgagaccgtggagcgggtggaaatcattcgtgatttgcgtttgggcatg
tttgacgtgctggtcggtattaatttgctgcgtgaggggttggacatccccgaggtgtca
ctggtagcgatacttgatgctgacaaggaaggctttttgcgttcggagcgtgcactcatt
caaaccataggccgcgctgcgcgccatattaacggtagcgcaatactctacgctgataaa
gttaccaattcgatgcgccgcgctatcgacgaaactgagcgcaggcggaacaagcagtta
ttgcacaatgaactgcatggcattactccccaaggtgtgcagaagcgcataaaagacatt
attgagggcagctatgagccagacgctgcgcgcaagcaattgaaaatagagcaagatcag
gaaaaatacttggcgatgagtgaacgtgatcttgccaaggaaattaaacggctggaaaaa
gagatgctgcaagcagcgaaaaacctcgaatttgagcgtgccagtgaattgcgcgatcaa
ttgaagaagctgcgggagagtgtatttatgtccccactgtga
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