Candidatus Nitrotoga sp. AM1P: W01_10930
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Entry
W01_10930 CDS
T06613
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00020
Citrate cycle (TCA cycle)
nim00190
Oxidative phosphorylation
nim00650
Butanoate metabolism
nim00720
Other carbon fixation pathways
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01120
Microbial metabolism in diverse environments
nim01200
Carbon metabolism
Module
nim_M00009
Citrate cycle (TCA cycle, Krebs cycle)
nim_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
nim_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
W01_10930 (sdhA)
00650 Butanoate metabolism
W01_10930 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
W01_10930 (sdhA)
00720 Other carbon fixation pathways
W01_10930 (sdhA)
Enzymes [BR:
nim01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
W01_10930 (sdhA)
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GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Thi4
Pyr_redox_2
HI0933_like
FAD_binding_3
GIDA
NAD_binding_7
FAD_oxidored
Lycopene_cycl
Pyr_redox_3
NAD_binding_8
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
BBJ23166
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Position
complement(1268740..1270503)
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AA seq
587 aa
AA seq
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MAVAKRTFDVVIVGAGGAGMRAALALSEAGLKVAVLSKVFPTRSHTVAAQGGIAASLGNI
SADNWHWHMYDTVKGSDYLGDQDAIEFMCRAAPEVVYELEHFGMPFDRLENGKIYQRSFG
GHMQDYGKTPVQRACAAADRTGHALLHTLYQKNMQSNTIFFVEWMALDLIRDEDGDVLGV
VAMEIETSEVMILQARATLFATGGAARIFQASTNAYINTGDGLGMAARAGIPLEDMEFFQ
FHPTGVYGAGVLISEGVRGEGGYLINKDGERFMLRYAPNAQDLASRDVVSRAIATEIKEG
RGCGKHGDHVLLKVDHIGDAVIRQRLPGIREISLKFAHVDPARDPIPVVPTAHYMMGGIP
TNYHGQVVAPYKTGPEEVVQGFYAVGECACVSVHGANRLGCNSLLDLLVFGREVARQIIE
DLQRNPHPKSLPHDAADRPLARLARLKSQKNGESVAEVGAEMRRVMQNHCGVFRFPDLLT
QGVEKIRTVAERVKNTMINDQSKVFNTACVEALELDNLIEVAQATMVSAAAREESRGGHA
RDDFPERDDDHWLKHSLYFSEGQKLDYKPVRLKPLSVESFPLKARVY
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggctaaacgcacatttgacgttgtaattgtgggggcgggtggcgcagggatg
cgtgcggctttggcattgtctgaggcgggcttgaaggtggcggtattgtccaaggttttt
cccactcgctcgcacaccgttgcggcgcaaggcggtattgcagcatcgctgggcaatatc
agcgcggacaattggcattggcatatgtacgacacggtgaaaggttcggattatctcggc
gatcaagatgccattgaatttatgtgtcgcgcggcaccggaagtggtgtatgaactcgaa
cacttcggtatgccgtttgatcgtttggaaaatggcaaaatttatcagcgttcgttcggc
ggccacatgcaagactatggcaagacccccgtgcagcgtgcctgtgccgctgctgatcgc
actggccatgccttgttgcatacgttgtatcaaaaaaatatgcagagtaataccattttt
ttcgtggagtggatggctctggatttaatccgcgacgaagatggggatgttctcggtgtg
gtggcaatggaaattgaaaccagtgaagtgatgattttacaggcgcgcgccacgctgttt
gctaccggaggcgcggcgcgcattttccaggctagcaccaatgcttatattaataccggc
gatggcctgggcatggcagctcgtgctggcattccgctggaggacatggaatttttccag
tttcatccgactggcgtgtacggtgcgggtgtgctgatttcggaaggtgtacgcggcgag
ggcggttatcttatcaacaaagatggtgagcgctttatgctgcgctatgcgccaaacgcc
caagaccttgccagccgtgacgtggtgtcacgcgccattgccactgagatcaaggaaggg
cgcggttgcggtaaacatggcgatcatgttttattgaaagtggatcacatcggtgatgct
gtcatccgtcagcgtctgcccggtatccgtgagatttccctaaaattcgcgcatgttgat
ccggctagggatcccattccggtggtgcccactgcgcattatatgatggggggcattccc
actaattatcatggccaagtggtcgccccttacaaaacagggccagaagaagtggtgcag
gggttttatgcggtgggtgaatgcgcttgcgtgtcggtgcatggtgctaaccgactaggc
tgtaattcattgcttgatctattggtgttcgggcgtgaggtggcgcggcagattatcgag
gacttgcagcgtaacccgcatccaaaatcattgccgcacgatgccgctgatcgtccactg
gcgcgacttgcaagactgaaatcacaaaaaaatggtgagagtgtggccgaagtgggggca
gagatgcggcgcgtgatgcaaaatcattgcggtgtgtttcggtttcctgacctgctgact
caaggcgtggaaaagattcgcacagtggccgagcgtgtcaaaaataccatgattaatgac
cagagtaaggtattcaatacggcatgtgtagaggcattggaacttgataatctaatcgaa
gtggcgcaagccaccatggtttctgctgcggccagagaagaaagtcgtggcggccacgcg
cgtgatgatttcccggaacgtgacgacgatcattggctgaagcattcactatattttagc
gaagggcaaaaactggattacaagccggttcggttgaagccattgagtgtggaatcattt
ccgcttaaggcacgggtatattaa
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