Candidatus Nitrotoga sp. AM1P: W01_15210
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Entry
W01_15210 CDS
T06613
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W01_15210 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nim03019
]
W01_15210 (pcnB)
Enzymes [BR:
nim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
W01_15210 (pcnB)
Messenger RNA biogenesis [BR:
nim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
W01_15210 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
RHH_3
Motif
Other DBs
NCBI-ProteinID:
BBJ23594
UniProt:
A0A455X2C9
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All DBs
Position
1750937..1752277
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AA seq
446 aa
AA seq
DB search
MIKKLFKRIFGKSARTRIEGKCHIIPFEIHGVSRDGISPAARRVTDGLQAAGYSAFVVGG
AVRDLLLNRHPKDFDIATDATPEEVRRVFRRSRIIGRRFRLVHVLFGEETVETSTFRRKI
ESEEAETDEHGRLLRDNEFGDQEQDAARRDFTANALFYDPSSQEIYDYHNGYADICANTL
RMIGDPAVRYREDPVRMLRAVRLSAKLGMKLEAATAAPIAKMKDLLGNVPQARLLDEMLK
LLLSGHAVECVKKLRSMDLHHGMLPMLDVILKQPLGEKFVMLALQNTDQRIHDGKSASPA
FLFAALLWHDVLSAWKVHQEAGERPVAALHAAMDEVLDRQQAQIAIPRRYDAVMKDLWLL
QPRFGQRGGQRPFRLLSQPHFRAAYDFLLLRCESGEVDSQLGLWWDEFQDAKDERRAEML
LPDEGVKKRRRRKKPGITVQAEPSTK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaagctgttcaagcgcatattcggaaaatctgcccgcactcggatagaagga
aaatgtcacatcatcccctttgagatacatggcgttagtcgcgatggtattagccccgct
gcgcgcagggtgacggatggtttgcaggcggctggttactcggcttttgtcgtgggcggt
gcggtgcgcgatttattactcaaccgtcaccctaaagactttgatattgcaaccgacgcc
acgccggaagaagtgcgccgcgtgtttcgtcgctcgcgcattatcgggcggcgcttccgt
ttggtgcatgtattattcggcgaggaaacggtggagacttccacctttcgccgcaagata
gagagtgaagaggcagaaactgatgaacatggtcggttgctgcgtgacaatgaatttggc
gatcaggagcaggacgcggcgcgacgcgattttaccgctaacgcgctattttatgatccg
tccagtcaggaaatttacgattatcacaatggctatgccgacatctgcgccaataccttg
cgcatgatcggtgatccggccgtacgttaccgcgaagatcccgtgcgcatgctacgtgcg
gtgcgcttgtcggccaagctgggcatgaagctggaggctgctaccgccgcacccattgca
aaaatgaaagatctgctgggtaacgtgccacaggcacgcctgctggatgagatgcttaag
ctgctgctatcgggccatgcggtggagtgcgtcaagaaactacggtctatggatttacac
catggaatgttgccaatgctggatgtgatattgaagcagcctttgggcgaaaagttcgtc
atgctggctttgcagaataccgatcagcgtattcatgatgggaaatctgcatcacccgct
ttcctgtttgccgcgctactgtggcacgatgtactgtctgcctggaaagtgcatcaggaa
gcaggcgaacgtccagttgcagcgctacatgcagcgatggacgaggtacttgacaggcag
caggcgcaaatcgccattccacgtcgttatgatgcagtcatgaaggatttatggttatta
caacctcgtttcgggcagcgtggtgggcaacggccatttcgcttgttgtctcaaccgcac
tttcgcgctgcttatgattttttgctactgcgttgtgaaagtggcgaggtggattcgcaa
ctgggtttgtggtgggacgagttccaggatgccaaggacgaacgccgcgccgaaatgcta
ttgcctgacgaaggggtcaagaaacgccgtcgtcgcaagaaaccgggcataacggtacaa
gcggaaccgtctactaaatga
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