Candidatus Nitrotoga sp. AM1P: W01_16390
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Entry
W01_16390 CDS
T06613
Name
(GenBank) hypothetical protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nim03032
]
W01_16390
03400 DNA repair and recombination proteins [BR:
nim03400
]
W01_16390
Enzymes [BR:
nim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
W01_16390
DNA replication proteins [BR:
nim03032
]
Prokaryotic type
DNA Topoisomerases
W01_16390
DNA repair and recombination proteins [BR:
nim03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
W01_16390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
BBJ23712
UniProt:
A0A455X3F1
LinkDB
All DBs
Position
complement(1878278..1880926)
Genome browser
AA seq
882 aa
AA seq
DB search
MASNLLIVESPAKAVTLKKYLGKDFEILATYGHVRDLIPKSGAIDTEHDFAMQYEIIARN
SKHVDAIAKAAAQADHIYLAPDPDREGEAIAWHVAELLKSKRNLKNKSMQRVVFYEITQS
AVREAVAHPREISIPLVNAQQARRALDYLVGFNLSPLLWRKIRPGLSAGRVQSPALRLIV
ERELEIEVFRSQEYWTVHLDSQKNSQPFTAKLFQYQGKKLEQLGIASETEYQKIFDNISA
AKLPPRVVRVEKKAKQRYAAAPFTTSTLQQEAARKLGMPTDRTMRIAQQLYEGIDIGGQT
VGLISYMRTDSVTLAQEALQEIRGYIAAQFAPDYLPKTAPVYKSKAKNAQEAHEAIRPTS
IARTPDSMREFLTIDQARLYEMIWKRTLACQMAPARFDTVSLDIRLGGDDTLFRASGQTL
IFPGFIAVYQESTDDSEEEENKKLPPLEEGETIPLDKLYGEQHFTQPPPRFSEASLVKTL
EEHGIGRPSTYASIISTLQAREYAMLDKKRFKPTDVGRVVIRFLTEHFTRYVDYGFTAQM
EDELDEISDGKRDWIPVLNDFWHPFTALIQDKKNIERKDVTQELIDEACPKCGKPLATRL
GKRGNFIGCTAFPECDYTRNLTGEADTAEARKELGSDPVSGLPVLLLRGPYGYYIQLGEV
EAGSKTKPKRISWPKELPPDTADLAAATQLLQLPKELGLHPESGKKIIVNIGRFGPYVGH
DGKFKSIPRGDSVFTIQLERAVALLAEARTSNAVLRELGAHPDDQKPVEVCNGRYGPYVK
HGKVNATLPKDLSPEEITLQEGLALLAERVAKGPSLKKTTAKKSVVPKESVAPKKTAAPK
KPAASKKSAASKKSVATKKSVATKKSAATKKSAATKKSAATK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcaatctactaatcgttgagtccccggccaaagccgtcaccctgaaaaaatat
ctgggtaaagattttgagattctggcgacctatgggcatgtgcgcgacctgatacctaaa
tcaggtgcgattgatactgaacatgattttgccatgcagtatgaaattattgcgcgaaac
agcaaacatgtagatgccattgccaaagccgctgctcaggcagaccacatctatctggca
cctgacccggatcgtgaaggggaagccattgcctggcatgttgctgagttactgaaaagc
aagcgcaatttgaaaaataaatccatgcagcgcgtggtgttctacgaaataactcagtct
gcggtgcgcgaagcggttgctcatccgcgtgagatttctattcccttggtgaacgcgcaa
caggcgcgacgtgcgctggattatttggtgggtttcaatctttcgccgctactatggcgc
aaaatacgccccgggctttctgccgggcgtgtgcaaagccccgcgttgcgcctgatcgtg
gaacgtgaattagaaatcgaggtattccgctctcaggaatattggactgtacatctcgac
agccagaagaatagtcaaccatttaccgccaaactgtttcaatatcaagggaaaaaacta
gagcagctgggtatagccagcgagacggaataccagaaaatttttgacaacatcagtgcg
gccaaattgccgccgcgcgtagtgcgcgtggaaaagaaagccaagcagcgctatgccgct
gctccatttactacctccacgctgcaacaggaggcagcacgcaaactaggcatgcccact
gaccgcactatgcgtatcgcccaacagctgtatgaaggtatcgacatcggcggtcaaact
gtaggactgatcagttatatgcgtactgattccgtcacgctggcacaggaagctctgcag
gaaatacgtggttatatcgctgcacaatttgcaccggactatttgcctaaaacggcaccg
gtctataaaagcaaagccaagaatgcgcaggaggctcacgaagccatacggccgacctcg
attgcacgcaccccggatagcatgcgggaatttctcaccatagatcaagcgcggctctat
gaaatgatctggaagcgtaccctcgcctgtcaaatggcccccgcacgtttcgatacagtc
agtcttgatattcgcctcggcggggatgacactctgtttcgcgccagtggccaaaccctc
atattccctggctttatcgctgtctatcaggaaagcacggatgacagcgaagaagaagaa
aacaaaaaactgccacctttggaagagggagagaccattcctcttgacaaactgtatggt
gagcagcattttacccagccgccaccgcgattttccgaagccagtttagtaaaaacttta
gaagagcatggcatcgggcgtccttcaacttacgccagcatcatttccacgcttcaggct
cgtgaatatgcaatgctggacaaaaaacgattcaagccgaccgatgtcggacgtgttgtt
atccgtttcctcactgaacattttacgcgctatgtcgattacggatttactgcgcaaatg
gaggatgaactggatgaaatttccgatggcaagcgtgactggattccagtattaaacgat
ttctggcatcctttcactgcgcttatacaagataagaaaaacatcgagcgtaaagatgta
acccaagaattaattgatgaagcctgccccaagtgcggcaagcctttagccacccgcttg
ggcaaacgtggcaactttattggctgcacagccttcccggagtgcgactacacacgcaac
ctcacaggtgaagccgataccgcggaagcgcgcaaggaattggggagcgatccagtcagt
ggcttgccagtgttattgttgcgcggtccttatggttattacatacaacttggcgaagta
gaggcaggttccaaaacaaaaccgaagcgtatttcctggccgaaggaattacccccagac
actgcagaccttgctgctgccacacaattactgcaacttcccaaggaattggggctccac
cctgaaagcggcaaaaaaattatcgtcaacattgggcgcttcgggccttatgtcgggcat
gatggaaaatttaaatccattcccaggggagacagtgttttcaccatacagttggaacgt
gcagtagcgctgttagctgaggcaagaacttccaatgcggtgttgcgggagctgggcgcg
catccggatgatcaaaagccggtggaggtctgcaatggccgctatgggccatacgtaaaa
catgggaaggttaacgccactctgcctaaagacctatccccggaagaaataacattgcaa
gaaggcttggcgctgctggcagaacgtgtggcaaaagggccctccctaaaaaaaaccaca
gctaagaagtctgttgtgccaaaagagtccgttgctccgaaaaagactgctgctccgaaa
aagcccgctgcttcgaaaaagtccgctgcttcgaaaaagtccgttgctacgaaaaagtcc
gttgctacgaaaaagtccgctgctacgaaaaagtccgctgctacgaaaaagtccgctgct
acgaagtaa
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