KEGG   Candidatus Nitrotoga sp. AM1P: W01_16890
Entry
W01_16890         CDS       T06613                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
nim  Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:nim00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nim03021]
    W01_16890 (rpoH)
Transcription machinery [BR:nim03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     W01_16890 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 UCR_14kD HTH_31 HTH_25 KORA HTH_10 HTH_DeoR IF2_N
Other DBs
NCBI-ProteinID: BBJ23762
UniProt: A0A455X3J8
LinkDB
Position
1932020..1932928
AA seq 302 aa
MALSAKIYTLEDITMNHTLTLPTPLTVGSLDQYIQAVNRFPLLTHDEELGLAIRFSRDND
LESARQLIVSHLRVVVSVARGYAGYGLPQADLIQEGNIGLMKAVKRYDPDHGVRLVSFAL
HWIRAEMHEYILRNWRLVKIATTKAQRKLFFNLRSMKQGLGSLKPQEASVIGQQLKVSTS
DVLEMEARFNSHEVALEPATNEEDDTSFAPITYLASAADSEPSCVLEHKQLEMQQNTGLT
RALASLDERSRRIIEARWLREDNTVTLHDLANEFGVSAERIRQIEQKAMAKMQVTMLSAS
PE
NT seq 909 nt   +upstreamnt  +downstreamnt
atggcattgagtgctaaaatttacactttagaggatataaccatgaatcacactttaacg
ttgccaacacccttgacagtgggtagcttagaccaatatatacaggccgtgaatcgtttc
ccgttacttacacatgatgaagagctaggcttagcaatccgcttcagtcgcgataatgac
ttggaatcggcacgccagcttatcgtctcgcacctacgtgtagtagttagcgtggcgcgc
ggctatgctggttatggcttaccacaagcagatttaatccaagagggcaatatcggccta
atgaaagcagtcaaacgctacgacccagatcatggtgtgcggttagtatcgttcgcactg
cactggatacgcgctgagatgcatgaatatattctgcgtaactggcgccttgtcaagatt
gccaccacaaaagctcaacgcaagctgttcttcaatttgcgtagcatgaaacagggatta
ggctcacttaaaccgcaagaagccagtgtaattggccagcagctgaaggtcagcacaagc
gacgtgttagagatggaagcccgtttcaatagtcatgaagtggcgctggagccagctaca
aacgaagaagatgatactagctttgcgcctatcacctacttggcatctgctgctgatagc
gagccatcttgcgtccttgagcacaaacaacttgaaatgcagcaaaacacaggcttaaca
cgcgcactggcgagcttggacgaacgcagccgtcgcatcattgaagctcgttggcttcgc
gaggacaacactgttacgctacatgatctcgcaaatgaatttggcgtgtcagccgaacgc
atacgccagattgagcaaaaagccatggcaaaaatgcaagtaacaatgctgtccgcttca
cctgagtaa

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