Candidatus Nitrotoga sp. AM1P: W01_17140
Help
Entry
W01_17140 CDS
T06613
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03030
DNA replication
nim03410
Base excision repair
nim03420
Nucleotide excision repair
nim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
W01_17140 (polA)
03410 Base excision repair
W01_17140 (polA)
03420 Nucleotide excision repair
W01_17140 (polA)
03440 Homologous recombination
W01_17140 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nim03032
]
W01_17140 (polA)
03400 DNA repair and recombination proteins [BR:
nim03400
]
W01_17140 (polA)
Enzymes [BR:
nim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
W01_17140 (polA)
DNA replication proteins [BR:
nim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
W01_17140 (polA)
DNA repair and recombination proteins [BR:
nim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
W01_17140 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
W01_17140 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_2
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BBJ23787
UniProt:
A0A455X3D9
LinkDB
All DBs
Position
complement(1961295..1964033)
Genome browser
AA seq
912 aa
AA seq
DB search
MKTLLLVDGSSYLYRAFHAMPDLRSPHGEPTGAIYGVLNMLRRLRADYPADYSACVFDAK
GKTFRDDLYADYKAHRLAMPEALAAQIAPLHQLIAASGWNILTIDGVEADDVIGTLAQQA
TVGGARCIISTGDKDLTQLVNSQVQLVNTMSNEMLDEAGVLAKFGLSPEHIVDYLTLTGD
TVDNVPGVPKVGPKTAVKWLSQYGTLDNLMAHAHEISGAVGNNLRNALDWLPQGRMLITV
KCDVELPVHFDELVPPPQDSVQLRSLFERCGFKSWLRELSLAAPSPSANQAGEEDGMRQA
SMFAEEAPVPASVHYETILTETQLDTWLKKIQQAELVSINTKTTALDMMTAQLVGISFAI
QPHHAAYLPLAHHYPGASDQLSREHALLKLKPWLESAHHKKLGHDLKYDQHIFANHAIQL
AGIAEDTLLQSYVLESHKSHDLDSLALRHLGVKTISYAEVVGKGAKQICFDQVDLATATH
YAAENADIILQLHQTLMPQIKMQGGLDGVYRNIELPARQVLYVMERNGVLIDSVKLAGQS
RELGEKLINIETQAYAAAGQPFNLNSPKQIQEILFDILGLPVKKKTPSGTPSTDEEVLQE
LALDYPLPKFLLEYRGMAKLKSTYTDKLPQMINRETGRVHTSYSQAVAVTGRLASSDPNL
QNIPVRTMEGRRIREAFIAPPGSRIVSADYSQIELRIMAHLSGDQGLLRAFSNAEDIHLA
TAAEVFSTPLDAVSNEQRRYAKVINFGLIYGMSAFGLASQLNIERSAAQQYIDLYFMRYP
GVADYMQRTRQQAKQQGYVETVFGRRLWLPEINGGNGMRRQAAERAAINAPMQGTAADLI
KLAMAAVQNWIEREQIHTRLIMQVHDELVLEVPENELALVKENLPGLMCHVAELKVPLEV
GLGEGENWEAAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacattgctgctggttgatggctcgtcttatctttatcgcgcattccatgcaatg
cctgacctgcgcagtccgcatggtgagccaactggggccatctatggtgtgcttaacatg
ttacgccgcttgcgcgctgattacccggcagattatagcgcctgtgtattcgacgctaaa
ggcaaaaccttccgcgatgatttatatgccgactacaaagcgcatcgccttgcaatgcca
gaggctcttgccgcgcaaattgctccactgcatcagcttattgccgcctccggctggaat
atcctgacaattgatggagtggaagcagacgatgtgatcggtacactggcacagcaggca
acagtagggggcgcacgctgcattatctccactggcgataaagatcttacgcaactcgta
aacagccaagtgcaactggttaacaccatgagcaatgaaatgctggacgaagcgggcgta
ctggctaaattcggattgtcgccagaacatatcgtcgattatcttaccctaaccggcgat
acggtcgataacgtgccaggtgtgcctaaggtaggccccaagactgccgtcaaatggcta
agccaatatggcacgctggataatttaatggcgcatgcacatgaaatttccggggcggtg
ggaaacaacttgcgtaatgcactggactggttgccgcaaggccgcatgctaattaccgta
aagtgcgatgttgaattgcccgtacactttgatgaactggtaccgccgccacaagacagc
gtgcaacttcgtagcttatttgaacgttgtggctttaaaagttggctacgcgaactgtct
cttgccgcgccttcgccctcagcaaatcaagctggagaagaggatgggatgcggcaagcc
agcatgtttgccgaagaagcacctgtgcctgcctcggtgcattacgaaacaatcctgacg
gaaacacaactcgacacttggctgaaaaaaatccagcaggccgaattagtgagcataaat
actaaaaccaccgcgctggacatgatgactgcgcagctggtgggtatttcatttgctatc
caaccccatcatgcagcttatttgccgctcgcccatcattaccccggggcatcggatcaa
cttagccgtgagcatgcgctattaaaacttaagccgtggctggaaagtgcacaccacaaa
aaactgggacacgatctcaaatatgatcagcacatctttgccaaccatgccattcagctt
gcgggcattgccgaggacacattattgcaatcttatgtgctggaaagccacaaatcgcac
gatttagacagccttgcgctgcgacatctcggcgtgaagactatcagctatgccgaagtc
gtgggcaagggcgctaaacaaatttgcttcgatcaagtggacttggcaaccgctacacac
tacgcagcagaaaatgccgacatcattctgcaactacatcaaacactcatgccgcagatc
aaaatgcaaggcgggctggatggggtgtaccgcaatatagaactacccgcacgacaagtg
ctatatgtcatggagcgcaatggtgtattgatagacagcgttaagctggcaggacagagt
cgtgaactgggcgagaaactcattaatattgaaacgcaggcatacgcggcggcggggcag
ccgtttaatctgaattcacccaagcaaattcaggaaatcctgttcgatatacttggcttg
ccggttaagaaaaaaacgcccagcggtacgccttccactgacgaagaggtattgcaggaa
ctggcgctggattatccgctacctaaattcctgctcgaatatcgtggcatggcgaaactt
aaatccacgtacaccgacaagctgccgcaaatgataaatcgcgaaaccgggcgcgtgcat
accagctactcgcaggctgtggcagtaacaggacgattagcttccagcgatcccaatttg
cagaacatcccggtgcgcacaatggaagggcgccgcatccgtgaagccttcatcgcaccg
cccggtagccgcatcgtctctgccgactattcgcaaatcgaattgcgcatcatggcgcac
ctgtccggtgatcagggtttgctcagagcattctcaaatgctgaggacatccatctcgcc
actgcggcggaagtattttccaccccgctagatgcagtgagtaatgagcaacggcgttat
gccaaggttatcaactttggccttatttacggcatgtctgccttcggcctggcttcacaa
cttaatatcgagcgtagcgctgcgcagcaatatattgatctctatttcatgcgttacccc
ggcgtggccgactacatgcagcgcacacgccagcaagctaaacagcaaggttacgtggaa
acggtgttcgggcgcagattgtggctgccagaaattaacggcggcaacggtatgcgccgc
caagcagctgaacgtgccgccattaatgcgcccatgcagggcaccgcagcagatttaatc
aagctggcaatggctgcggtgcaaaattggatagagcgtgaacagatacatacgcgactg
atcatgcaagttcatgatgaactggtgctcgaagtgccggagaatgaattggcgctggta
aaagaaaatctacctgggctaatgtgtcacgtagctgagctgaaggtgccgcttgaagtt
ggactgggtgaaggcgagaactgggaagcggcgcattga
DBGET
integrated database retrieval system
