Candidatus Nitrotoga sp. AM1P: W01_17250
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Entry
W01_17250 CDS
T06613
Symbol
pilR
Name
(GenBank) type 4 fimbriae expression regulatory protein PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
W01_17250 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
nim02022
]
W01_17250 (pilR)
02035 Bacterial motility proteins [BR:
nim02035
]
W01_17250 (pilR)
Two-component system [BR:
nim02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
W01_17250 (pilR)
Bacterial motility proteins [BR:
nim02035
]
Pilus system
Twitching motility proteins
W01_17250 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
HTH_50
AAA_16
HTH_30
AAA
HTH_28
VpsR
PDE8A_N
Motif
Other DBs
NCBI-ProteinID:
BBJ23798
LinkDB
All DBs
Position
1974826..1976184
Genome browser
AA seq
452 aa
AA seq
DB search
MTVDIQASPARVLVVDDEPDILELIELALLRMGLQVDRASNVQEALQQLDTKTYQLCLTD
MRLPDGEGLEVVQYIIARNMHVPVAVITAHGNMENAIFALKAGAFDYLPKPVALTQLRAL
VNAVLKLPPLSATVRKGVRTLLGLSPAMEKVRDLIDRVARSQAPVHISGESGSGKELAAR
LIVEKSARRDQPFITVNCGAIPETLMESEFFGYRKGAFTGAEKDREGLFQAANGGTLFLD
EVADLPLSMQVKLLRVIQEKKVRKVGATQEESVDVRIISATHNALAEQVQQGKFRQDLYY
RLNVITLLMPPLRAMRDDIAEVANHFLARLCGDAKVELASSALKALQQYDFPGNVRELEN
IIERALALCSDDIIMPADLQLAPTDFAETTTKPSVAGKYPLTDYLDSVERAAILEALQQT
NFNRTAAAKVLGVTFRALRYRMDRLDITDKDE
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgaccgttgatatacaggccagccctgcgcgcgtcttggtggtggatgacgagccggat
atattggagttgatcgagttggcgctgctacgcatgggattgcaggtcgaccgcgctagt
aatgtgcaagaagctttgcaacaattagatactaaaacatatcagctatgtctgacagat
atgcgcctgccggatggagaaggactggaggtggtgcaatatattattgctcgcaacatg
catgtgccagtcgcggtaattaccgcgcatggcaacatggaaaatgcgatttttgcactt
aaggcgggcgctttcgattacctccccaagccagttgcgctgacccagctgcgcgccttg
gtcaatgctgtgctaaagctgccgccactgtctgccaccgtacgaaaaggcgtgcgaaca
ttactgggactttccccggccatggaaaaggtgcgcgacctgatcgatcgggtggcacgt
agccaggcaccggtacatatcagtggcgaatcaggtagtggaaaagaactggctgcgcgg
ctgatcgttgaaaaaagcgctcgacgcgaccagcctttcatcacggtaaactgcggtgca
atcccggaaacgcttatggaaagcgaatttttcggttatcgcaagggcgccttcactggt
gcggaaaaagatcgcgagggtttatttcaggctgccaatggcggtactttattccttgac
gaggttgccgatttacctctctccatgcaggtaaaattgttgcgggtaatccaggagaaa
aaagtgcgtaaggtgggcgccacgcaagaagagtcggtggatgtacgtatcatcagcgcc
acccataatgcgttggcggagcaagtacagcaggggaaattccgtcaggatttatattac
cgtctgaatgtgattaccctgcttatgccaccgttgcgcgcaatgcgcgatgacattgcc
gaggtcgccaaccattttttagctcgtttgtgcggtgatgcaaaggtcgaattagcatcg
tcagctttgaaagcacttcaacaatacgattttccgggcaacgtgcgcgaattggaaaat
ataatcgaacgggcacttgcattatgttcggacgacattatcatgccagccgatttgcag
cttgcacccacggattttgctgaaacgaccaccaaaccaagtgtagctggcaaatatcca
cttaccgattatctggatagcgtcgaacgcgcagccattctagaggcgttacagcaaacc
aatttcaaccgcacagctgcggccaaggtgctgggagtgacttttcgcgctttgcgctat
cgtatggatcgattggatatcactgacaaggatgaataa
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