Candidatus Nitrotoga sp. AM1P: W01_17300
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Entry
W01_17300 CDS
T06613
Symbol
msbA
Name
(GenBank) lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
W01_17300 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
nim02000
]
W01_17300 (msbA)
Enzymes [BR:
nim01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
W01_17300 (msbA)
Transporters [BR:
nim02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
W01_17300 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_25
AAA_29
AAA
DEAD
NACHT
DUF5906
MMR_HSR1
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
BBJ23803
LinkDB
All DBs
Position
1981951..1983708
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AA seq
585 aa
AA seq
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MTSSQLYLRLLDYIKPYWRIFALSILGMVVAAATEPLLPVLLKTMLDGTFVHKDETIIRL
IPLFILAIFLVRGVATFVATYTITWVGSKVVMDLRDEMFSKLLSLPARFYDDHATGNLIS
KLTFDVTQVTAAATTVVTIGIRDSLMIAGLLGWLFYLNWKLTLLSLIMAPVIIFIMKTIS
GRLRVASRNSQRAMGDITQVIEETVTAHKVVKLFGGQQYESQRFSSQANWVRRHTMKQTA
AAAANIPIVQMVAAVALAVIVYLATEQSRSDETTVGGFLSFIAAMLMLTPPLKRLASVSE
HLQRGLAASESVFELLDTPSEIDTGKKLITHASGRLKFEHVNFSYQKEEKLALCDINLEI
PAGQTVALVGASGSGKSTLANLVPRFYSPNNGHITLDDYDLAELTLASLRANIALVSQDI
VLFNDTVAANIAYGQMRKVPETEIIAAAQAAHAMEFINEMPQGLQTLVGERGVRMSGGQR
QRIAIARAILKNAPILILDEATSALDSESERHVQAALETLMQGRTTLVIAHRLSTIEKAD
RIVVLQKGEIVEIGTHQELLAQGDVYAQLHRSQFMWNDVARDNSG
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccagttcacagctttatttgcggttgctcgactatatcaaaccctactggcgcata
tttgcactttccatccttggcatggtagtggctgcggctacggagccgctattgccggtt
ttgctcaaaaccatgctagacggcacattcgtgcacaaagatgaaactatcatccgattg
atccctctgttcatcttggcgatttttcttgtacgcggggtggctacttttgttgctacc
tacactatcacctgggtaggaagtaaggtagtgatggacttacgtgacgaaatgttcagt
aagctgctttccctgcctgcgcgcttttatgatgaccatgcgactggcaacctgatctca
aaattgacttttgatgtaacacaggtaacagctgccgctacaaccgtagtaaccattggc
atccgcgattctcttatgattgcgggattgctgggctggcttttttatctcaactggaag
cttactctactcagcttgatcatggcgcctgtgattatctttatcatgaaaaccatcagc
gggcgcttacgcgtagccagccgcaattcacagcgcgcgatgggagacatcactcaagtg
attgaagagactgtaaccgcgcacaaggtggttaaacttttcggcgggcagcaatatgaa
agccagcgctttagcagtcaagctaactgggtacgccgtcacaccatgaaacagaccgcc
gccgctgccgccaatatacccatcgtacagatggtggcagcagtggcgcttgcggtcatc
gtttatctcgctaccgaacaatcgcgcagcgatgaaacaaccgtaggtggcttcctttcc
tttattgcagccatgttgatgttgaccccgccgctaaaacggctcgctagcgtcagcgag
cacttgcagcggggactagcagcttcagaaagtgtgtttgagttgcttgatacgcccagt
gaaatagataccggcaagaaattaattactcacgcctctggccggctgaaatttgaacat
gtaaacttttcttatcagaaagaagagaaattggctttatgtgacattaacttggaaatt
cctgcagggcagacagttgcgctagttggtgcctcaggcagtggcaaaagcactctagcc
aacctcgtaccgcgcttttattccccgaataacggacatatcacactggacgattatgac
ctcgcggagctcacgctggccagcctgcgcgctaatatcgcactggtaagtcaagatatt
gtgctattcaatgacaccgttgccgccaacattgcctatggccagatgcgcaaagtaccg
gagacagaaattattgccgccgcgcaggcagcccatgcaatggaatttattaatgaaatg
ccgcaaggtttgcaaacactggtgggcgaacggggagtgcgcatgtcgggcggacagcgc
caacgcattgccattgctcgcgctattctcaaaaatgcaccaattcttattctggatgaa
gccacatccgcattggatagcgaatctgagcgtcatgtgcaagctgcgctagaaacccta
atgcaagggcgcaccacactagtaattgctcatcgtttgtccaccattgaaaaagccgac
agaattgttgtattgcaaaaaggcgaaattgttgaaatcggcacgcaccaggaattactt
gcccagggggatgtatacgcacagctgcaccgcagccaattcatgtggaatgatgttgcc
cgcgacaattcgggataa
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