Candidatus Nitrotoga sp. AM1P: W01_18930
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Entry
W01_18930 CDS
T06613
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00300
Lysine biosynthesis
nim00470
D-Amino acid metabolism
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01120
Microbial metabolism in diverse environments
nim01230
Biosynthesis of amino acids
Module
nim_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
W01_18930 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W01_18930 (dapF)
Enzymes [BR:
nim01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
W01_18930 (dapF)
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Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Hexokinase_2
Motif
Other DBs
NCBI-ProteinID:
BBJ23966
UniProt:
A0A455XES2
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All DBs
Position
2159705..2160535
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AA seq
276 aa
AA seq
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MRLKFTKMHGAGNDFVVLNGLRQRIQLTPEQLRLLADRHFGVGCDQILLVETAQHPDADF
CYRIFNADGGEVEQCGNGARCFMRFVHDHKLTHKREIVVETKNGLITPRLEDNGQVTVNM
GAPIFEAARIPFLGSSDAVIQTLEVAGETVQITALSMGNPHAVQVVTDVEQAPVAIQGAL
IEQHPRFSQRVNAGFMQIVDHKHIKLRVYERGAGETLSCGTGACAAVVTGIRRGLLDARV
NVATRGGVLNIAWAGNGTPVFMTGPAIAVFEGEINL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgagactaaaatttaccaaaatgcacggtgccggtaatgatttcgtagtcctcaatggg
ttgcgccagcgcattcagcttacaccggagcagttgcgcctgttagctgaccggcacttt
ggcgtgggctgcgatcaaattctgttagtggaaactgctcagcatcccgatgcggatttt
tgttatcgtatcttcaatgcggatggcggcgaggtggaacaatgcggcaatggcgcacgc
tgctttatgcgctttgtacacgatcacaaactgacacataagcgtgagatcgtggtagaa
acaaaaaatggcttgattaccccgcgccttgaggacaatggtcaagttacagtaaacatg
ggcgcaccgatttttgaggctgcacgtattccgtttcttggcagtagtgatgctgttatc
caaacgctagaagtagcgggcgagacagtgcagattacggcactatcgatgggcaatcca
catgcggtacaggtagtgactgatgtggaacaggcaccagtcgccatacagggggcgctc
attgaacaacacccacgtttttcgcaacgagtgaatgcaggtttcatgcagatagtggat
cataaacacatcaaattacgcgtgtatgaacgcggcgctggtgaaacactgtcttgcggc
actggcgcatgcgccgcagtggtaaccggcatccggcgcggcctgttggacgcgcgcgtg
aatgttgccacgcgcggtggggtgttgaacatagcttgggccggaaacggtacaccggta
tttatgaccggaccagcgattgctgtatttgaaggcgaaataaatttataa
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