Candidatus Nitrotoga sp. AM1P: W01_19020
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Entry
W01_19020 CDS
T06613
Symbol
gcvP
Name
(GenBank) glycine dehydrogenase (aminomethyl-transferring)
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00260
Glycine, serine and threonine metabolism
nim00630
Glyoxylate and dicarboxylate metabolism
nim00670
One carbon pool by folate
nim00785
Lipoic acid metabolism
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01200
Carbon metabolism
Module
nim_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
W01_19020 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
W01_19020 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
W01_19020 (gcvP)
00670 One carbon pool by folate
W01_19020 (gcvP)
Enzymes [BR:
nim01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
W01_19020 (gcvP)
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Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
BBJ23975
UniProt:
A0A455XCH4
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Position
complement(2166900..2169770)
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AA seq
956 aa
AA seq
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MITTDKFVNRHNGPRKNDVKAMLDTIGAGSVDELIDQTIPAAIRLKKPLNLPSGMTEYQY
HKHLRGVAAKNKIFKTYIGLGYYNTIVPPVIQRNVLENPGWYTAYTPYQAEISQGRLEAL
LNFQTMIMDLTGMEIANASLLDESTAAAEAMAMLFNNRTHRAIENGANKFFVSNECYPQT
IDLLKTRSTPMGIELVIGDFKTGTLDNSIYGALLQYPTADGTVHDYADFVKRAKANGTTI
AVAADILSLVLLTPPGKWGADVVVGSTQRFGVPMGYGGPHAAYFACREEYKRSIPGRIIG
VSIDADGNQALRMALQTREQHIRRDKATSNICTAQALLAIMVSMYAVYHGPEGLKGIAQQ
VHFTAIALATELKKLGYIIEDGIYFDTIKINGTDNAKIKQLAQAAQINFRYTDNAITISV
DQTIDTDDLNALISVFAHAVGKTPSKITEEQIFNQKSLIKNRQSLILQHPVFNIYHSESE
LMRYIKRLENKDLSLTHSMISLGSCTMKLNAASELMPITWPEFAHIHPFVPVEQAAGYHE
IIDDLDKSLSEITGFEKMSFQPNSGAQGEYAGLLVIQAYHQSRGDAHRNIALIPTSAHGT
NPASAAMCGLKIVLVKCDKVGNIDVSELREKAIQHKDNLACLMITYPSTHGVYEESIIEI
TNIIHENGGQVYMDGANMNAQVGLTSPGNIGADVCHLNLHKTFAIPHGGGGPGMGPIGVA
KHLAPFLPSHSLVKTGGENGIHAVSAAPYGSALILLISYGYIKMLGNDGVTEATRIAILN
ANYIKDSLKDHFPTLYSGANGRCAHEMILACVAFKKEVGIEVGDIAKRLMDYGYHAPTVS
FPVADTLMIEPTESESKEELDRFCSAMISIRKEIDEIITGKADKEDNVLKNAPHTAKSTL
TSNWKHSYSREKAVYPLKWVQDNKFWPSVARVDNVHGDKNLICACPPIQAYADDAL
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgattacaaccgataaatttgtaaaccgtcataacggtccgcgcaaaaatgatgttaag
gcaatgcttgatacaattggtgcaggttctgtagatgaattaattgatcaaaccatccct
gctgcgatccgcttaaaaaaaccattgaacttaccatcagggatgactgaatatcaatac
cacaagcatttacgtggtgttgcggcaaagaataaaatttttaaaacctatattggttta
ggttattacaacacgatagttccccctgttatccagagaaatgttttagaaaacccgggt
tggtataccgcttacacgccttatcaggcagagatttcacaaggtcgtttagaggcactg
ttgaatttccaaaccatgattatggatttaaccggaatggaaatagcaaatgcatcattg
ctggatgaatccactgcggcagctgaagcaatggcaatgttgttcaacaatcgcacgcac
cgagcaattgaaaatggagcgaacaagtttttcgtttccaacgaatgttacccgcaaact
atcgatttattaaaaacacgttcaactccaatggggattgaattagtgattggtgacttt
aaaaccggaacgttagataacagtatttatggtgcattgcttcaatatccaaccgctgat
ggcacagttcacgattacgctgactttgtaaaaagggcaaaagcaaatggaaccaccatt
gctgtagcagccgatatactgagtttagtattactgacccctccaggcaaatggggagct
gatgttgttgttggttccacacaacgctttggtgtccctatgggttacggcggcccgcac
gcggcatattttgcttgccgtgaagaatataaacgatccattcctggccgcatcattggt
gtttcgattgacgcggacggaaatcaagcattacgtatggcattacaaacgcgcgagcaa
cacatacgtagagacaaagccacctccaacatttgtactgcacaagcattattagccatt
atggtaagtatgtatgcggtatatcacggaccggaaggcctcaaagggattgcacaacaa
gtacattttactgctatagcattggcaaccgagttaaaaaaattaggctatatcattgaa
gatggaatttattttgataccatcaaaatcaatggaacagacaatgcgaaaattaaacaa
ttagcgcaagcagcacagattaatttccgttatacggataatgcaattactatttctgtt
gatcaaactatcgacaccgatgacttgaatgcgcttattagtgtattcgcacacgccgtt
ggcaaaaccccttctaaaattactgaagaacagatttttaatcaaaaatctttgatcaaa
aatcgtcaatctttaatcctgcaacatcctgtatttaatatttaccattccgaatccgag
ctgatgcggtatatcaagcgattggaaaacaaggatttatctttgactcattccatgatt
tcattaggctcttgtactatgaaattaaatgccgcctccgaattaatgcctattacatgg
cccgaatttgcccatatccacccctttgtacccgttgaacaagcggcgggttaccatgaa
ataatcgatgacctggataaatcattaagtgagattacgggtttcgaaaaaatgagtttt
cagcccaacagcggcgctcagggcgaatatgccggattattggtcattcaggcataccat
caatcacgtggtgatgcgcacagaaatattgcgttaattcccacatcggcacatggcacc
aatcctgccagcgctgcaatgtgtggcctgaagatagtcttggtgaaatgtgacaaagta
ggaaatattgatgtaagcgaattgcgtgaaaaagcaattcagcataaagataatctggca
tgcttaatgattacatacccaagcactcacggtgtttacgaagaaagtatcattgagatt
accaacatcattcatgaaaatggcggacaagtttatatggatggcgccaacatgaatgca
caagtaggcttaaccagccccggcaatattggcgccgatgtttgccacttgaatttacat
aaaacttttgcaattcctcacggtggtggcggcccaggtatgggacccattggcgttgca
aaacacctggctccttttttgccttcacattccttagtaaaaactgggggagaaaacggc
atacacgcagtatctgcagcgccttacggcagtgcactaattttattgatatcttatgga
tatataaaaatgttaggcaacgatggcgttaccgaagcaacacgtatcgcaattttaaat
gccaactatattaaagactcattaaaagatcatttccctactttatatagtggtgccaat
ggacgttgcgcgcacgaaatgattttagcctgcgttgcgtttaaaaaagaagtcggaata
gaagtaggggacattgcaaagcgattaatggattatgggtatcatgcaccgacagtttca
ttcccggtagccgatacattgatgattgaaccaaccgaaagtgaatcaaaagaagaatta
gatcgtttttgctctgctatgatttctatacgcaaagaaattgatgaaataattacaggt
aaagcggataaagaagataacgtacttaaaaatgcaccgcatacagcgaaatcaactctc
acgagcaattggaaacacagctattcgcgcgaaaaagcagtttatccattaaagtgggta
caagacaacaaattctggccaagtgttgcccgtgtagacaatgtccatggtgataaaaat
ctgatttgtgcttgcccaccaatacaagcgtatgccgatgatgcgctataa
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