Candidatus Nitrotoga sp. AM1P: W01_19550
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Entry
W01_19550 CDS
T06613
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00470
D-Amino acid metabolism
nim00550
Peptidoglycan biosynthesis
nim01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
W01_19550 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
W01_19550 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nim01011
]
W01_19550 (murD)
Enzymes [BR:
nim01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
W01_19550 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
nim01011
]
Precursor biosynthesis
Amino acid ligase
W01_19550 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
NAD_binding_7
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
BBJ24028
UniProt:
A0A455X537
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All DBs
Position
complement(2217010..2218407)
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AA seq
465 aa
AA seq
DB search
MPLTNKSVLVLGLGETGLSLVRWLSAQGARVRAADSRDLPPSLNALRTQFPETELHCGVF
RSELLNGIDLIAISPGIPLSNQLVVQAVARGIPVMGDIELFAQSLPQDRCPKIIAITGAN
GKSTVTSMVGAMCRAAGLDTEVAGNISPAVLDVLLQRQGQQPDVWVLELSSFQLETTSSL
SADAATVLNISEDHLDRYSDINEYIAAKARIFRNNGQKSVQVLNRDDENSAGMALSERIQ
NSFGLNTPPPTDNDWGIDSSSEGVWLMHGQRRVMNANELRVAGLHNVANALAALALCHGI
DLPLTPSLNALRAFEGLPHRVQPIAEINDIVYYDDSKGTNVGATIAALQGLRRPAVLIAG
GEGKGQDFVPLYPVVMQYARAVVLIGRDADKIAAVLQNCGVPVVHAQTMVDAVRQSASLA
QPGDAVLLSPACASFDMFRNYNHRAEAFIAAVHALQGDVPCSPQA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgccattaacaaataaatcagtactggtgcttggtctcggcgaaaccgggttatcgctt
gtgcgctggcttagtgcacaaggcgcgcgggtacgcgctgccgacagtcgtgatctcccc
ccatctctgaatgcattgcgcacacaattccctgagacagagctgcactgcggtgtattt
cgcagcgaattacttaatggcatcgacttgatcgccatcagtccaggtatacccttgagc
aatcaattggtcgtgcaggcggtggcacgtggtattccagtaatgggcgatattgaatta
tttgcccaatcattgccacaagatcgatgcccgaaaatcattgccatcaccggtgccaat
ggtaaatccacggtaaccagcatggtcggtgcaatgtgccgtgcagcaggtttggacaca
gaagtggctggcaatatttcgcccgcagtgctggatgtgctattacaacgccaagggcag
caaccggatgtttgggtacttgaactttccagctttcaattagaaaccacctcctctctc
agtgcggatgcagccacggtactcaacatcagcgaagaccatctcgatcgttattccgac
ataaacgaatatatagccgccaaggcacgcatcttccgtaacaatggacaaaaaagcgtg
caagtgctcaatcgcgatgatgaaaacagtgctggcatggcgttatcagaacgcatacaa
aattcatttggtttgaataccccgcctcccaccgataatgactggggcatagatagcagc
agcgagggtgtatggttaatgcatggccaacggcgtgtaatgaatgccaacgaattgcga
gtggcggggctacataatgtggcgaatgcactggctgctctggccttatgccatggcata
gatttaccgctgacaccgtcactgaatgcgttacgcgctttcgagggcttgcctcatcgc
gtgcaacctatcgcagaaatcaacgacatcgtttattacgacgattccaaaggaacgaat
gtcggcgctaccatagcagcgctacagggtttaagacggcctgccgtgttaattgccggc
ggagagggcaaaggacaggattttgtgccgctctatccggtagtgatgcagtatgcgcgt
gcagtagtgctcatcggtcgcgatgccgacaagattgcagcggtgctacagaattgtggt
gtgcctgtggttcatgcacagaccatggtcgatgcagtacgtcagagtgcctctctggca
cagccgggcgacgcagtcctgttatcgccagcctgcgccagctttgatatgttccgtaat
tacaaccatcgtgctgaagcatttatcgccgcagtgcatgctttgcaaggggatgtgcca
tgctcgccgcaagcctga
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