Candidatus Nitrotoga sp. AM1P: W01_21550
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Entry
W01_21550 CDS
T06613
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
W01_21550 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nim03019
]
W01_21550 (groL)
03110 Chaperones and folding catalysts [BR:
nim03110
]
W01_21550 (groL)
03029 Mitochondrial biogenesis [BR:
nim03029
]
W01_21550 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nim04147
]
W01_21550 (groL)
Enzymes [BR:
nim01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
W01_21550 (groL)
Messenger RNA biogenesis [BR:
nim03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
W01_21550 (groL)
Chaperones and folding catalysts [BR:
nim03110
]
Heat shock proteins
HSP60 / Chaperonin
W01_21550 (groL)
Mitochondrial biogenesis [BR:
nim03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
W01_21550 (groL)
Exosome [BR:
nim04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
W01_21550 (groL)
Exosomal proteins of other body fluids (saliva and urine)
W01_21550 (groL)
Exosomal proteins of breast cancer cells
W01_21550 (groL)
Exosomal proteins of colorectal cancer cells
W01_21550 (groL)
Exosomal proteins of bladder cancer cells
W01_21550 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
phage_tail_N
Motif
Other DBs
NCBI-ProteinID:
BBJ24228
LinkDB
All DBs
Position
complement(2426862..2428535)
Genome browser
AA seq
557 aa
AA seq
DB search
MAAKDVKFHDTARSKMVAGVNILANAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVQEGMKFVAAGMNPMDLKRGI
DKAVLAVAEELKKLSKPCTTSTEIAQVGSISANSDTNIGKIISDAMDKVGKEGVITVEDG
KSLDNELELVEGMQFDRGYLSPYFINDQEKQNVVMENPYILLHDKKISNIRDLLPLLEQV
AKAGRPMLIIAEDVDGEALATLVVNNIRGILKTVAVKAPGFGSRRQSMLEDIAILTGGTV
IAEEVGLSLEKATLADLGQAKRIEVNKENTILIDGAGNEEAIQGRISQISKQFEEATSDY
DKEKLVERKAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL
RAKSVVASLKGDNHDQDAGITIVLRAMESPLRCIVDNAGDEPSVVVNKVLEGKGNYGYNA
ASGQYGDMLAMGVVDPTKVTRIALQNAASIAGLMLTTGCMVAELYEDKPAVDLGGGGGGG
MGGMGGMGGMGGMGGMM
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaaaagacgtgaaattccatgatacggcacgcagtaaaatggttgcaggtgtt
aacattttagccaacgcggttaaagtgactcttggcccaaaaggtcgtaatgtagtattg
gagcgctcttatggcgcgcccacaatcaccaaggatggtgtgtctgtcgccaaggaaatc
gagctgaaggataagttcgagaacatgggcgcgcaaatggtcaaggaagtagcctctaaa
acctctgacgtagcgggtgacggcacgactaccgcaactgtgctggcacagtccatcgta
caggaaggcatgaaatttgttgctgctggtatgaacccgatggatctgaagcgcggtatc
gacaaggcagttcttgctgtcgcagaggagttgaagaagttatctaagccatgcactacc
tctaccgaaattgctcaagttggctcaatttctgccaactctgacaccaatataggcaag
atcatttctgacgcgatggacaaggtcggtaaagaaggcgtaatcaccgttgaagatggt
aaatcgctcgataacgaacttgaattggtagagggtatgcagtttgatcgcggctatcta
tctccatattttattaacgatcaagaaaaacaaaacgtagtgatggaaaacccctacatt
ttgttacacgacaaaaaaatctccaacattcgtgatctgttgccgctgctggagcaagtt
gccaaggcaggtcgtccgatgttaattatcgctgaagatgtagatggtgaagcgctggct
actctagtagtgaacaacatccgtggaattttgaaaacagttgcagttaaagctccaggc
tttggcagcagacgtcaatccatgttggaagacattgctattctgactggcggcacagtg
attgccgaagaagtcggtttgtcgcttgaaaaggctactctggcagatttgggtcaagcc
aagcgtatcgaagtaaataaagaaaataccatccttatcgatggtgcaggtaatgaagaa
gcgatccaaggccgtatctctcaaatctccaaacaattcgaagaggcaaccagcgattat
gacaaagaaaagctggtagagcgcaaagccaaattggctggcggtgtggcagtgattaaa
gttggcgctgcaactgaagttgaaatgaaagagaaaaaagcgcgcgtggaagatgcactg
catgcgacccgtgcggcagtggaagaaggtattgttcccggcggcggcgtcgcattgttg
cgtgccaaatcagtagtagcaagtttgaagggggacaaccatgatcaagacgcaggcatt
accattgtgttgcgtgccatggaatcgccactacgttgcatcgtagataacgcaggcgac
gagccttcggtagtggtcaacaaggtgctggaaggcaaaggcaactatggctacaacgct
gcgagtgggcagtatggtgacatgctggcaatgggcgtggtcgaccccactaaggttact
cgcattgcattgcaaaatgctgcttctatcgctggcttgatgctgaccactggatgcatg
gtggctgaattatacgaagacaagcctgccgttgatttaggcggcggcggcggtggcggt
atgggtggcatgggtggcatgggcggtatgggcggtatgggtggcatgatgtaa
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