Candidatus Nitrotoga sp. AM1P: W01_22060
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Entry
W01_22060 CDS
T06613
Symbol
rfbB_2
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim00521
Streptomycin biosynthesis
nim00523
Polyketide sugar unit biosynthesis
nim00525
Acarbose and validamycin biosynthesis
nim00541
Biosynthesis of various nucleotide sugars
nim01100
Metabolic pathways
nim01110
Biosynthesis of secondary metabolites
nim01250
Biosynthesis of nucleotide sugars
Module
nim_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
W01_22060 (rfbB_2)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
W01_22060 (rfbB_2)
01055 Biosynthesis of vancomycin group antibiotics
W01_22060 (rfbB_2)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
W01_22060 (rfbB_2)
00525 Acarbose and validamycin biosynthesis
W01_22060 (rfbB_2)
Enzymes [BR:
nim01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
W01_22060 (rfbB_2)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
Sacchrp_dh_NADP
Gp_dh_N
Motif
Other DBs
NCBI-ProteinID:
BBJ24279
UniProt:
A0A455X7I6
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Position
complement(2472364..2473431)
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AA seq
355 aa
AA seq
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MNKILITGGAGFIGSAVIRQLITETDATVINVDKLTYAGNLQSLISVADDPRYHFEHVDI
CDAATVARLFHEHQPDAVMHLAAESHVDRSITGPAAFIETNIFGTYTLLNAAREYWSELS
AERKNTFRFHHISTDEVYGSLGETGFFTENTAYQPNSPYSASKASSDHLVRAWYHTYGLP
VVTTNCSNNYGPYHFPEKLIPLIILNACNGKPLPIYGKGDNIRDWLYVDDHARALRVVLE
RGRVGETYNIGGWNEKTNLEVVYEICAILDELRPQGAPHASLITYVQDRPGHDHRYAIDA
GKIAHELGWKPLETFETGLRKTVQWYLTNPDWVDAVISGEYQNWIQQNYGDRETS
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaatccttattaccggcggtgccggatttattggctccgcagttattcgccaa
ctaatcacagaaaccgacgcgacagtcatcaacgtcgataagctgacctatgccggcaat
ttacagtccttaatatcggtagcagacgatccccgctaccacttcgaacatgtggatatt
tgtgatgcggctacagtcgcaagactatttcatgaacatcaaccggatgcggtgatgcat
ttagctgcggaatcccatgtcgatcgatccatcactggcccggcagcctttattgaaacc
aatatttttggcacatacacactcctaaacgcagcacgggaatactggagcgagctttct
gcagaacgcaaaaacacttttcgcttccaccatatatccacagatgaggtatatggcagc
ctaggtgaaaccggtttttttaccgaaaacaccgcttaccaaccaaactcaccttactcg
gcaagcaaagcgtcttcagaccacctggtgcgtgcttggtatcacacttacggcttgccc
gtggtcactaccaactgttccaataactacggcccttatcatttcccggagaagctcatt
ccattgatcatcctgaatgcatgcaatggaaaaccgctacccatttatggcaagggtgac
aatatccgcgactggttgtatgtggacgaccatgcgcgtgcgttgcgcgtggtacttgag
cggggccgggtgggggaaacttacaatattggtggctggaatgaaaaaaccaatctggaa
gtagtgtatgaaatttgcgcgattcttgatgagctccgccctcaaggtgcgccacatgca
tcccttatcacctacgtacaggacaggcccgggcatgaccatcgctacgcgatcgatgcc
ggtaaaatcgcccatgaactgggctggaaaccgctggaaacttttgaaaccggattgcgc
aagacagtgcaatggtatctgacaaacccggattgggttgatgctgtcattagtggggaa
taccagaattggatccaacaaaattacggtgatagggaaacatcatga
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