Candidatus Nitrotoga sp. AM1P: W01_24810
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Entry
W01_24810 CDS
T06613
Name
(GenBank) hypothetical protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
W01_24810
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nim03400
]
W01_24810
Enzymes [BR:
nim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
W01_24810
DNA repair and recombination proteins [BR:
nim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
W01_24810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
AlkA_N
Dsc3_N
Motif
Other DBs
NCBI-ProteinID:
BBJ24554
UniProt:
A0A455X4Y4
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All DBs
Position
complement(2790785..2791705)
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AA seq
306 aa
AA seq
DB search
MERVIQTHLSCSIPLADDFRVGDALDFHGRDTLAVAERIDGHCLQKGLMWEGQAASLTIR
LEIGHADVELAIDGITNANQDALIQMVRRMLGLTQRIEDFESIYRTHPQLGLLIARQPGL
RVPLSATPFEALTWAITGQQISIGAAISLRRKFIQLTGVKDSSGLACYPDAGKVANLSET
ELRQAGFSQTKAQTLIMLSREVAANRLPLKAWMTTMPVEEIHKQLLSLRGIGPWTVNYAL
LRGFGWLDGSLHGDAAVRRKLQLLLSSTEKVTESFTERRLAEFSPWRALVAAHLWTIPSE
FLPVVK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggaacgggtaatacaaacgcacctatcgtgttcgattccgttggctgatgattttcga
gttggtgatgcacttgatttccacggccgcgatacattggcggtggctgaacgaattgac
gggcactgtctacaaaaaggcttgatgtgggagggacaggcggcttccttgacgattcgc
ttggaaattggacatgccgacgtggaactggccattgatggaataacaaacgccaatcaa
gatgctctgatacagatggtgcggcgcatgctcggcctgacgcaacgaatcgaggacttc
gagtccatctatcgcacccatccgcaactagggctactcattgcccggcaacccgggttg
cgggtgcctctttcggcaacgcctttcgaagcactgacttgggcgattaccggacagcag
atcagcattggtgcagcgatttccctgcgccgcaagttcattcagctgactggcgtgaaa
gattcctctgggctggcgtgttatccagatgcaggtaaagttgcaaacttgagcgaaacg
gaactgcgccaggcgggattctcgcaaaccaaggctcaaacactgattatgttgagtcgc
gaggttgcagcaaaccgtctaccactgaaggcatggatgaccacaatgccggttgaggaa
attcacaagcaattgctaagcttgcgcggcataggcccttggacggtcaattacgcgctg
cttcgtggtttcggctggcttgatggctcgctgcatggagatgcggccgttcgacgcaaa
ttacagctgttacttagttccacggaaaaagttaccgagagcttcacagaacgccggttg
gctgagttttcgccttggcgcgctttagtagcagcacatctctggacgataccctctgag
tttctgcctgttgttaaataa
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