Candidatus Nitrotoga sp. AM1P: W01_25340
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Entry
W01_25340 CDS
T06613
Name
(GenBank) hypothetical protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Pathway
nim03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
W01_25340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nim03400
]
W01_25340
Enzymes [BR:
nim01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
W01_25340
DNA repair and recombination proteins [BR:
nim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
W01_25340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
VWA_3_C
Motif
Other DBs
NCBI-ProteinID:
BBJ24607
UniProt:
A0A455X662
LinkDB
All DBs
Position
2848799..2849548
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AA seq
249 aa
AA seq
DB search
MNREEAILRELNLYPLWQRREQAQSVLEQVTAVVQPVTEQITSKIVVEKVDMQNLDSYDW
PKLQALVKNCTACTLRASCTQTVFGMGDVRADWLFVGEWPGADEDIQGEPFVGQSGKLLD
NMLAAIKLKRGHNVYITNIVKCYPPGNRTPEANEIAQCVPYLDRQIQLIQPKLIVALGET
AALLLGHGAMLSGVRGKLHDYRGSSSYSLVKGIPLIITYHPTYLLHTPLKKTEAWDDLCL
AVATMQGLV
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcgagaagaagcaatactacgtgagcttaatctctatccgctgtggcaacggcgc
gaacaagcacagtctgtactagagcaagtaacagcagttgttcaaccggttacagagcaa
ataactagcaagattgtcgtggaaaaagtagacatgcagaatctggacagttacgactgg
cccaagttacaagcattggtaaaaaattgcacggcgtgcacgctgcgggcgagttgtaca
cagacggtttttggtatgggtgatgtgcgggcagattggttgttcgtgggcgaatggccg
ggcgcggacgaagacattcaaggtgagccatttgtggggcaatccggcaagttgctagat
aatatgctggccgcaattaagttgaagcgcggtcacaatgtttatattaccaacatcgtt
aaatgctacccacccggtaatcgcacgccagaagccaatgagattgctcaatgtgtgcct
tacctggaccgccagattcaactcatccagcccaagctgatcgtggctctgggtgaaacc
gccgcattattattggggcatggtgccatgctgtcaggtgtgcgcggcaaactgcacgac
tatcgcggctcatcctcttattctttggtgaaaggtatcccactcatcatcacataccat
ccgacctatctgctgcacaccccgctgaaaaaaaccgaagcatgggacgatctgtgcctg
gcagttgctacgatgcaggggttggtttga
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