Candidatus Nitrotoga sp. AM1P: W01_26210
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Entry
W01_26210 CDS
T06613
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
nim
Candidatus Nitrotoga sp. AM1P
Brite
KEGG Orthology (KO) [BR:
nim00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
nim03009
]
W01_26210
Enzymes [BR:
nim01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
W01_26210
Ribosome biogenesis [BR:
nim03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
W01_26210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
DUF5818
Motif
Other DBs
NCBI-ProteinID:
BBJ24694
UniProt:
A0A455X5C5
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All DBs
Position
2940107..2940649
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AA seq
180 aa
AA seq
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MSRILLFNKPYGVICQFGRDGLHPTLANYITVPYVYPAGRLDTDSEGLVLLTDDGLLQHR
ITDPLHKLAKIYWVQVEGKPSEMALVQLRSGVKLPDFVTLPAMARLMEEPVNLWRRAPPI
RERKNKPTSWLELIIREGKNRQVRRMTAAVGYPTLRLIRYRIGEWTLDGLESGIWREAAL
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgcatcctgttgttcaacaaaccttatggcgtgatctgtcagtttggccgcgac
ggcctgcatccaacgctagcaaattatatcactgtcccttatgtatatccagccggacgg
ctggatactgacagtgaaggtttggtgttgcttactgatgacggtttgttgcaacaccgt
attacggatccacttcataagttggccaagatttattgggtgcaagtagaaggcaagcca
agcgagatggcattagtgcaattgcgtagtggagtaaagctgcctgattttgttactttg
cctgctatggcaagattgatggaagaaccggtaaacttatggcggcgtgctcctccgatc
cgcgagcgtaaaaataaaccaaccagttggttggaactcattattcgtgagggtaagaac
cgtcaggtgcgccgcatgacagccgcagtgggttaccctactttgcgtttgattcgttac
cggattggcgagtggacgctggatgggttggagtcaggcatctggcgtgaggctgcgtta
taa
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