KEGG   Nitrosopumilus adriaticus: NADRNF5_0047
Entry
NADRNF5_0047      CDS       T03758                                 
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
  KO
K03124  transcription initiation factor TFIIB
Organism
nin  Nitrosopumilus adriaticus
Pathway
nin03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nin00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    NADRNF5_0047 (tfb)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nin03021]
    NADRNF5_0047 (tfb)
Transcription machinery [BR:nin03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     NADRNF5_0047 (tfb)
 Prokaryotic type
  Archaeal type
    TFB
     NADRNF5_0047 (tfb)
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Zn_Ribbon_1 Trm112p Sigma70_r4 HTH_11 Baculo_ME53 RPA_interact_C Cyclin_N HTH_AsnC-type Sigma70_r4_2 Auto_anti-p27 RB_B Zn_ribbon_tTFIIB Ribosomal_S27 Zn_ribbon_RRN7
Other DBs
NCBI-ProteinID: AJW69747
UniProt: A0A0D5BZZ2
LinkDB
Position
complement(46068..46973)
AA seq 301 aa
MVSKGKDLCPRCAQGKLVTDNESGEMFCSKCGFVITEKLQEAGPEWRSFTQDEGGNKARA
GAPTSLTMHDMGLATIINPVNKDASGRPLTSSMKSTIERLRTWDSRSQVHEPVDRNFRQA
FSELNRLKDKLAISDAVIEKAAYIYRKALEKGLVRGRSISALMASALYAACRDTETPRNL
KDVEQAANIKRKDIARCYRLLVKELDLKMPVTDSIQCVARIASRIGIAEKTKRHATKVLK
MAQDNEVSAGKDPMGLAAAALYLSCVKNGEDKTQRDIAEAANVTEVTIRNRYKGLKESLD
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggtaagcaagggtaaggatctatgtccaagatgtgcacaagggaaactagtaactgat
aatgaatcaggagaaatgttttgctcaaagtgtggatttgtaattactgaaaaattacaa
gaagcaggacctgaatggagatcctttacccaagatgagggtggaaacaaggcaagagcc
ggcgctccaacatcacttacaatgcacgacatgggtcttgcaacaataatcaatcctgta
aacaaggatgcgtctggcagaccactaacatcatctatgaaaagtaccattgaaagacta
agaacttgggatagtagaagccaagttcatgaaccagttgatagaaatttcaggcaggca
tttagtgaattaaacagactaaaagacaaactggcaatctctgatgcagtaattgaaaaa
gctgcatacatttacagaaaagcactagagaaaggcctagtgcgaggtcgctccatttca
gcccttatggcatcagctctttatgctgcatgcagagatactgaaactccaagaaacctc
aaggatgtagagcaagcagctaacatcaaaagaaaagatattgcaagatgttacagattg
ctagtaaaagaacttgatttgaagatgccagtaactgattcaattcaatgtgttgcaaga
attgcaagcagaattggaatcgcagagaaaacaaaaagacatgcaacaaaggtgctaaaa
atggctcaagacaatgaagtctcagccggaaaagatcctatgggattggctgctgctgct
ttgtatctttcttgtgttaaaaacggtgaagacaagactcagcgtgatatcgcagaagct
gcaaacgttactgaagtaaccattcgaaataggtacaaaggcctcaaagaatcattagat
ctataa

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