Nitrosopumilus adriaticus: NADRNF5_0515
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Entry
NADRNF5_0515 CDS
T03758
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_0515 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_0515 (tfb)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NADRNF5_0515 (tfb)
Prokaryotic type
Archaeal type
TFB
NADRNF5_0515 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_AsnC-type
Sigma70_r4
TetR_N
HTH_11
Cyclin_N
Zn_ribbon_tTFIIB
Zn_Ribbon_1
Phage_fiber_2
Motif
Other DBs
NCBI-ProteinID:
AJW70211
UniProt:
A0A0D5C0F5
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All DBs
Position
427919..428794
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AA seq
291 aa
AA seq
DB search
MRCGKNSMLTDDTTGEQFCSKCGYVVSEKTQESGPEWRSFQKDGGADPARTGAPSSLLMH
DMGLSTVINPLNKDASGKPLSTSMKSTIERLRTWDNRSQVHEPVDRNLRQALGELTRLKD
KIAISANVLEKAAYIYRKALEKKLVRGRSISAMIAASLYAACRDTATPRTLKDVADAANV
KRKDIARCYRLLHYELELKMPVVDSVQCIARISSKLDITEKTKRFAIKVLKEAQEREESA
GKDPMGLAASALYLSCVHNGASVTQRDIAEAAGVTEVTIRNRYKGLKASHS
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atgcgatgtggaaaaaattccatgctaactgatgatactaccggcgaacaattttgctct
aaatgtggttatgttgtttctgaaaaaactcaagaatccggtccagaatggagatcgttt
caaaaagatggcggcgcagatcctgcaagaaccggagctccatcatcattactaatgcat
gatatgggattgtctactgtaatcaatcccttaaacaaagacgcatcaggaaaaccactt
tcaacatcaatgaaaagtacaattgagagattaagaacttgggataaccgaagtcaagtt
catgagccagttgatagaaacttgagacaagcacttggtgaattaaccagattaaaagac
aagattgcaatttctgcaaacgttcttgaaaaagcagcttacatttacagaaaagctttg
gagaaaaaacttgtaagaggaagatcaatctctgcaatgattgcagcatcactttatgct
gcatgtcgagatactgcaacacctcgaactctaaaagatgttgcagatgctgcaaacgta
aaaagaaaagatattgctagatgttatagattattacattatgaattggaattgaaaatg
cctgttgttgattcggtacaatgtattgctcgaatttcaagcaagcttgacattacagaa
aaaacaaaacgatttgcaatcaaagtgctcaaggaggcccaagagcgtgaagagtctgct
ggaaaagatccaatgggtcttgcagcatctgcattatacttgtcatgtgtacataatggc
gcatctgtaactcaaagagatattgccgaagctgcaggtgtaaccgaagtgactatccga
aatcgttacaaaggcttgaaagccagtcattcataa
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