Nitrosopumilus adriaticus: NADRNF5_0746
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Entry
NADRNF5_0746 CDS
T03758
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NADRNF5_0746
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nin03019
]
NADRNF5_0746
03009 Ribosome biogenesis [BR:
nin03009
]
NADRNF5_0746
Enzymes [BR:
nin01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NADRNF5_0746
Messenger RNA biogenesis [BR:
nin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NADRNF5_0746
Ribosome biogenesis [BR:
nin03009
]
Prokaryotic type
rRNA helicases
NADRNF5_0746
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
AAA_30
CMS1
Motif
Other DBs
NCBI-ProteinID:
AJW70440
UniProt:
A0A0D5C280
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All DBs
Position
complement(607234..608550)
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AA seq
438 aa
AA seq
DB search
MTKFTELGLKDEVLKGITDQHFDEAFPIQEAVIPVLLSGRDVVGQAHTGSGKTAAFALAM
LQEIQPKNGIQGLIMAPTRELAMQISDEVKKFGKYTGIKVATVYGGQGMGIQLDALHRGV
EIVVATPGRLIDHLKRGSIELRDVTHIVLDEADTMLDMGFVDDISFILDLAPEDRVMSLF
SATMPTEILRLSEEYLNNPKQFLLDADDLSGEGIDQSYLVIKDRDKFKYLIDFIKKTKGQ
SIVFCSTKYRTRDVAKFLHQEKYNAVAIEGDMSQHRREQSMGKFRSGKADILVATDVASR
GIDVPRVELVVNYDVPNQEMAYFHRIGRTARAGALGKAVTFVSYSSVGDWNLIKRQIKVP
LRDLNQEMGIQISIPDPLKRQTPSRRYGGQSRSNYSRGGRSGGYGGSDRNRNPRDDRGGR
KRYRDNDNKNSYGGRSRW
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatttacagaattaggattaaaagatgaagtactaaagggaattactgatcaa
cactttgatgaagcttttccaattcaagaggctgttatccccgtacttctttcaggaaga
gatgtagtaggtcaagcacatacaggttcaggaaaaactgcagcatttgcattggcaatg
ctacaagagatacaaccaaaaaatggaattcagggattaatcatggcccccacaagagaa
cttgcaatgcagattagtgatgaagttaaaaaatttggaaagtatacaggaatcaaagta
gctacagtttacggaggacaaggaatgggaattcagttagatgctcttcatagaggggta
gagattgttgttgcaactccaggtagattaattgatcatctaaaaagaggttctatcgaa
ctcagagatgtaacccacattgttcttgatgaagcagacacaatgctcgatatgggattc
gtagatgacatttcatttatcttagatttagcaccagaagatagagttatgtcattgttt
tctgcaacaatgcctactgaaatcctaagattgtcagaagaatatctcaacaatccaaaa
caattccttttagatgccgatgatctcagtggagagggaattgatcaatcatatttagta
ataaaagaccgagataaattcaagtatctaattgattttatcaaaaaaacaaaaggtcaa
tcaattgtattttgttcaacaaaatatagaaccagagacgtagcaaaattcctccatcag
gaaaaatacaatgcagttgcaattgaaggggatatgtctcaacatagaagagaacagtcc
atgggcaaattcagaagtggaaaagcagacattcttgttgcaacagatgtggcatcaaga
ggcattgacgtcccaagagtagaactagtagtaaattatgatgtaccaaatcaagagatg
gcatatttccatagaattggaagaactgcaagagctggggcacttggtaaagctgttaca
tttgtatcatattcatcagtaggagattggaatctcattaaaagacaaatcaaagttcct
ctaagggatttaaatcaagagatgggaattcaaatatccattccagatccgctaaaaaga
cagacaccatctagaagatatggcggccaatcaagatccaattattccagaggaggccgt
tcaggaggatatggaggatcagacagaaatagaaatcccagagacgacagaggcggaaga
aagagatatcgagacaatgataataaaaatagctacggcggacgtagtagatggtaa
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