Nitrosopumilus adriaticus: NADRNF5_0949
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Entry
NADRNF5_0949 CDS
T03758
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_0949 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_0949 (tfb)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NADRNF5_0949 (tfb)
Prokaryotic type
Archaeal type
TFB
NADRNF5_0949 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_RRN7
Cyclin_N
A2L_zn_ribbon
BRF2-like_C_cyclin_rpt
Ribosomal_S27e
Lar_restr_allev
DUF4503
Zn_ribbon_tTFIIB
Zn_ribbon_IS1595
TerY_C
HscB_4_cys
RB_B
Ribosomal_S27
HEF_HK
Motif
Other DBs
NCBI-ProteinID:
AJW70642
UniProt:
A0A0D5C2K4
LinkDB
All DBs
Position
complement(779643..780554)
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AA seq
303 aa
AA seq
DB search
MLKNTMISGPKCPSCGNQKIVTDQDTGELFCGKCGFVVTDKVADTGAEWRSFSNDETNRT
RVGAGTSLTMHDMGLSTVIGAANKDSTGKPLSASVKSSIERLRTWDSRTQAHSSADRNLR
QALNEMDKLKDKLALTDAVVEKAAYIYRKAMERKLVRGRSIQGLVAACLYASCRNTETPR
TLDDIAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGISRIASIAELSEKSKRKAIEI
LNQAKTIGIVAGKDPMGIAAAALYLACISTGEIKSQKDISIASGVTEVTIRNRCAGLRKM
LND
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaaaatacaatgatctcaggtccaaagtgcccatcatgtggaaatcaaaagatt
gtgacagatcaggacaccggagaattgttttgtggaaaatgtgggtttgtagttacagac
aaagttgcagatacaggtgcagagtggcgctctttttcaaatgatgaaacaaacagaaca
agagtaggagctggaacatcattaacaatgcatgacatgggattatcaactgtaatagga
gctgccaacaaagactctactggaaagccattatctgccagtgtaaaaagttccattgaa
agactaagaacttgggatagtagaacgcaagcacattcatctgcagacaggaatctaaga
caagcactaaatgagatggataaattaaaagataaacttgcgttaactgatgcagtagta
gagaaagcagcttacatttacagaaaagcaatggagagaaaattagtcagaggtagatca
attcaaggattagttgcagcatgtctttatgcatcatgcagaaacacagagactcccaga
acactagatgacattgcaaaaggaatcaacatcagaagaaaagatgttgcaagatgttat
agattgattttcagagaattagaattaaaaatgccagtagttgatcctgtcaaagggatc
tcaagaattgcaagtattgcagagctaagtgaaaaaagcaaacgaaaagcaattgagatt
ctaaatcaggcaaaaacaattggcatagttgcaggaaaagatcccatgggtattgcagca
gctgcattatacctagcatgtatcagtacaggagaaataaaatctcaaaaggacatctca
attgcatcaggagtaacagaagttacgattagaaacagatgtgcgggattaagaaaaatg
ctcaatgattga
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