Nitrosopumilus adriaticus: NADRNF5_1002
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Entry
NADRNF5_1002 CDS
T03758
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_1002 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_1002 (tfb)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NADRNF5_1002 (tfb)
Prokaryotic type
Archaeal type
TFB
NADRNF5_1002 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Zn_Ribbon_1
Ribosomal_L37e
RB_B
Cyclin_N
HypA
DZR
Zn_ribbon_tTFIIB
C1_2
Motif
Other DBs
NCBI-ProteinID:
AJW70693
UniProt:
A0A0D5C289
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All DBs
Position
complement(824849..825781)
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AA seq
310 aa
AA seq
DB search
MVIFLVLETVNADSVCRRCGQKSMLTDNVTGERFCSKCGFVISETLQDSGPEWRSFSKEG
GADPTRTGAPTSLAMHDRGLATIISPMNKDASGKPLSSSMKSTIERLRTWDSRSKVNASA
DKNLRQALSQLSTLKDKLSLSDSVIEKASYIYRKALEKGLVRGRSISALIAAALYAACRD
TETPRTLKDVADAGNIKKKDISRCYRILHQELELKMPVVNPVQCIARISSKLDISEKTKR
YAAKVLQIAQDHEESAGKDPMGLAAAALYLSCVKNGEDRTQRDIAEASNVTEVTIRNRYK
GLRLDQDTEI
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
gtggtaatatttttggttttagaaactgttaatgcagatagtgtttgtagacgttgtgga
caaaaatccatgttaacagacaatgttacaggagaaagattttgttctaaatgtgggttt
gtaatttctgagacattacaagattcaggaccagagtggagatcattttcaaaagaaggc
ggagcagatcctacaagaacaggagccccaacatcacttgctatgcacgacagaggactt
gcaacaattatcagtcctatgaataaagacgcatctggaaaaccactttcatcatctatg
aaaagtacaattgagagactaagaacttgggatagtaggagcaaagtcaatgcatctgca
gataaaaatctacgacaagccctcagtcagctatcaacattaaaagacaaattatcactt
tcagattcagtaattgagaaagcatcatacatttacagaaaagcattggagaaaggtcta
gttagaggtcgctccatttcagccctaattgctgctgcattatatgcagcatgcagagat
actgaaactcctagaactctaaaagatgtcgcagatgcagggaatattaagaaaaaagat
atttcacgatgttatagaattttacatcaagaattagaactaaagatgccagtagttaat
ccagttcagtgtattgcaagaatttcaagtaaactagacatttcggagaagactaaacgc
tatgctgccaaagttctgcagattgctcaagatcatgaggaatcagcaggaaaagatcct
atggggctggcagctgctgcattatacctctcatgtgtcaaaaatggggaagatagaact
caaagagacatcgcagaagcctcaaatgtgactgaagtgaccattagaaatagatacaaa
ggcctcagattagaccaagatacggagatatag
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