Nitrosopumilus adriaticus: NADRNF5_1010
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Entry
NADRNF5_1010 CDS
T03758
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_1010 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_1010 (tfb)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NADRNF5_1010 (tfb)
Prokaryotic type
Archaeal type
TFB
NADRNF5_1010 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
HTH_AsnC-type
Cyclin_N
HTH_Crp_2
HTH_11
Zn_ribbon_tTFIIB
HTH_3
ORC6_2nd
Ribosomal_L37e
RB_B
A2L_zn_ribbon
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AJW70701
UniProt:
A0A0D5C1T7
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All DBs
Position
830151..831071
Genome browser
AA seq
306 aa
AA seq
DB search
MVTTNQDSLCLRCGKNSLLTDDVTGERFCGKCGFVISETSQDSGPEWRSFSKDGGADPAR
TGAPSSLMIHDMGLSTVINPINKDASGKPLSTSMKSTIERLRTWDSRSQVHEPIDRNLRQ
ALSDLNKLKDKVAIPANVLEKASYIYRKALEKKLVRGRSIAAMIAASLYAACRDTETPRT
LKDIADAANVKRKDIARCYRLLHHELELKMPVVDSIQCIARISSKLDISEKTKRYAVKVL
KDAQERKESAGKDPMGLAATALYLSCVHNGVSITQRDLAEAAGVTEVTIRNRYKGLKADQ
SSKSEI
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggtaactaccaatcaagactctctttgtttacgttgcggaaaaaattctttgcttacc
gacgatgttacaggagaaagattttgtggtaaatgtgggtttgtaatttctgagacatct
caagattcaggtcctgaatggagatcattttcaaaagacggtggtgcagatcctgcaaga
actggtgcaccatcatctttgatgattcacgacatgggattgtccacagtaattaatcca
attaacaaagatgcttctggaaagccactttccacatcaatgaaaagtacaattgagaga
ctcagaacttgggatagtagaagtcaagttcatgaacctattgataggaatcttagacaa
gcgttaagcgatttaaataaattaaaagacaaggttgccatccctgcaaatgttcttgaa
aaagcatcatacatttacagaaaagctttggagaaaaaacttgttcgaggtcgttctatt
gcagcaatgattgcagcatcactttatgctgcatgcagagacactgaaactcctagaacc
ctaaaagatattgctgatgctgcaaatgtaaaacgaaaagatattgcaagatgctataga
ttacttcaccatgaattggaattaaaaatgcctgttgtagattccattcagtgtattgca
agaatttcaagtaaactagacatttcggagaagactaaacgttatgctgttaaagttcta
aaagatgcgcaggaacgcaaagaatctgcaggaaaagatcctatgggactggcagctact
gcattatacttgtcatgtgttcataatggggtatcgataactcaaagagaccttgcagaa
gctgcaggtgttactgaagtaacaattagaaatcgatacaagggtctcaaagcagatcag
agttccaaatcagaaatttag
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