Nitrosopumilus adriaticus: NADRNF5_1526
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Entry
NADRNF5_1526 CDS
T03758
Symbol
tfb
Name
(GenBank) Transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_1526 (tfb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_1526 (tfb)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
NADRNF5_1526 (tfb)
Prokaryotic type
Archaeal type
TFB
NADRNF5_1526 (tfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
Ribosomal_S27
HTH_AsnC-type
Cyclin_N
RPW8
Lar_restr_allev
zf-CCHC_5
Zn_ribbon_3
HEF_HK
HTH_3
Zn_Ribbon_1
Motif
Other DBs
NCBI-ProteinID:
AJW71207
UniProt:
A0A0D5C479
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All DBs
Position
1223116..1224024
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AA seq
302 aa
AA seq
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MVKKVNPKDRCPRCGQGTVVTDANTGENFCGKCGFVITDKVEESGPEWRSFSNEGENKSR
AGVPTSLAMHDMGLATVINPQNRDATGKPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQ
AFSELDRLKDKLAVGDAVIEKAAYIYRKALEKGLVRGRSISALIASALYAACRDTETPRT
LKDIGQASNIKRKDIARCYRLLLRELNLKMPVVDPIKCISRIASKAGLSEKTKRKATKIL
QTAEENKISAGKDPMGLAAAALYVACVTNGENKTQRDVAEAAGVTEVTIRNRYKGLKVAL
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaaaagtaaatccaaaagacagatgcccaagatgcgggcaaggaacagttgtt
acagatgccaatacaggggagaatttttgtggaaaatgtggatttgtaattacagataaa
gttgaagagtcaggaccagaatggagatcattttcaaatgaaggtgaaaacaaaagcagg
gcaggagttccaacatcactggcaatgcacgatatgggtctagccacggtaatcaatcca
caaaatcgagatgcaacaggaaaaccattaactgcttcaatgaagagcacaattgagaga
ttaagaacttgggatagcagaagtcaagttcatgagccagtggatagaaatttcagacaa
gcgtttagtgaattggacagattgaaagacaagcttgcagtaggggacgcagtaattgaa
aaagcagcatacatttacagaaaagcattagagaagggcctggtaagaggacgctcaatt
tcagcattaatcgcatctgcactttatgcagcatgcagagatacagaaacaccacgaact
ctaaaagacattggccaagcaagcaacatcaaaagaaaagacattgctagatgttacaga
ctattactaagagaattgaatttaaaaatgccagtagttgatccaatcaaatgtatttca
agaattgcaagtaaggcaggactatcagaaaaaacaaaaagaaaggcaactaaaatttta
caaactgctgaagaaaataaaatttcagcaggaaaagatccaatgggattagcagctgct
gcactctatgtagcatgtgtcacaaacggagaaaacaaaacacaaagagatgttgcagaa
gctgcaggagtgaccgaagtcacaattagaaatagatacaaaggcttgaaagtagcatta
aatctctaa
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