Nitrosopumilus adriaticus: NADRNF5_1561
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Entry
NADRNF5_1561 CDS
T03758
Symbol
tbp
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
NADRNF5_1561 (tbp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
nin03000
]
NADRNF5_1561 (tbp)
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_1561 (tbp)
Transcription factors [BR:
nin03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
NADRNF5_1561 (tbp)
Transcription machinery [BR:
nin03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
NADRNF5_1561 (tbp)
RNA polymerase III system
TFIIIB
NADRNF5_1561 (tbp)
RNA polymerase I system
SL1/TIF-1B
NADRNF5_1561 (tbp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
AJW71242
UniProt:
A0A0D5C4B8
LinkDB
All DBs
Position
1258948..1259508
Genome browser
AA seq
186 aa
AA seq
DB search
MPQTKPIVSVENVVASASVDQKMDLNEITKTFPDVEYHPDQFPGLVFRLKTPKTATLIFT
SGKMVCTGSKSEDMARKAVKTVVQKLRKGGIKVKKDATVQIQNIVASINLGGKIHLEQAA
RTLPRSMYEPEQFPGLIHRMLDPKTVILLFSSGKLVCTGAKQEPDVYRSVNNLHALLEEK
NLMIYD
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgccacaaacaaaacctattgtaagcgtggaaaatgttgtagcctcggcttctgtagac
cagaagatggacttgaatgaaatcacaaaaacatttccagatgtagaatatcatccggat
caattcccaggactagtttttagattaaagacaccaaaaacggcaactttgattttcact
tcaggtaaaatggtatgtactggttccaaatctgaagatatggcaagaaaagcagtaaag
acagttgttcaaaaacttcgaaaaggcggaattaaagtaaaaaaagatgcaacagtacaa
attcaaaatattgtagcatcaatcaatctgggtggaaaaatccatttagagcaagcagca
cgaacattacctagaagtatgtacgaaccagaacaatttccaggtcttattcacagaatg
cttgatcctaagacagtaattctattattttcatcaggaaaacttgtctgcacaggagca
aagcaagagccagacgtatacagatctgtcaacaacttgcatgcattgctagaagaaaag
aacctaatgatttatgattaa
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