Nitrosopumilus adriaticus: NADRNF5_1742
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Entry
NADRNF5_1742 CDS
T03758
Symbol
rrp
Name
(GenBank) Exosome complex component Rrp41
KO
K11600
exosome complex component RRP41
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NADRNF5_1742 (rrp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nin03019
]
NADRNF5_1742 (rrp)
Messenger RNA biogenesis [BR:
nin03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
NADRNF5_1742 (rrp)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
NADRNF5_1742 (rrp)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AJW71420
UniProt:
A0A0D5C4Z5
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All DBs
Position
complement(1397193..1397927)
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AA seq
244 aa
AA seq
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MGGRDATMVLLDENGIRCDGRKVDEPRRIMIKAGGLKNADGSAYIEFGDNKILVGVFGPR
DVHPKHMSNTDTGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPR
TAVDVFIEVLQADGGTRCAALSAASVALADAGIPMRDMVAACAAGKVADTIVLDVNNEED
QAGQADMPIGYMPSLEKITLLQLDGVLTPEEYKKCVQVGVDGCKIVYDIQKKALQDKYFG
NGAD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaagagacgcaacaatggtcctattggacgagaatggtatacgctgtgatggc
cgtaaagtagacgagccaagacgaatcatgattaaagctggcggactaaaaaacgcagac
ggttctgcttacattgaatttggtgataacaaaatcctagttggtgtttttggtccaaga
gatgttcatccaaaacacatgtcaaacactgatactggaatcttaagagttagatatcat
atggaaccattctctgttggagaaagaaagaaccctgctccttcaagaagagaaattgaa
atttccaaagtaatcaaagaagcattggaaccagcagttatgttggaaaaattcccaaga
actgcagttgatgttttcattgaagttttacaagccgatggtggaactcgatgtgctgca
ctttcagcagcatccgttgctttagcagatgctggaatcccaatgagagatatggtagca
gcttgtgctgcaggtaaagttgcagatactatagttttagatgttaacaatgaagaagac
caagcaggtcaagccgacatgccaattggttatatgccaagtcttgaaaaaattacatta
ttacaattagatggtgttcttactcctgaagaatacaaaaaatgtgttcaagttggagtt
gatggctgtaaaattgtttatgatattcaaaagaaagcactccaagacaaatactttgga
aacggagctgattaa
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