Nitrosopumilus adriaticus: NADRNF5_1904
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Entry
NADRNF5_1904 CDS
T03758
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase
KO
K03041
DNA-directed RNA polymerase subunit A' [EC:
2.7.7.6
]
Organism
nin
Nitrosopumilus adriaticus
Pathway
nin03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nin00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
NADRNF5_1904 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nin03021
]
NADRNF5_1904 (rpoA)
Enzymes [BR:
nin01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
NADRNF5_1904 (rpoA)
Transcription machinery [BR:
nin03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
NADRNF5_1904 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
DUF5667
Speriolin_C
Motif
Other DBs
NCBI-ProteinID:
AJW71581
UniProt:
A0A0D5C4E2
LinkDB
All DBs
Position
complement(1515419..1519210)
Genome browser
AA seq
1263 aa
AA seq
DB search
MSLQAIKSIDGIRFSVWSPTEVRKYSVAEITAPETYDEDGMPVQGGLMDGRLGTLEPGQK
CLTCGNTAARCPGHFGHIELAEPILHIAFIDNIYKLLQSTCRSCARLKVPQEDLNEFKKI
KDKHAAYTVISQKRIPEQIIEKAKKAKECPHCGKTQYELVFTKPTIFVEKTEIGEHRLLP
ITIRERFSQILDEDLQLLSYDPVTARPEWFILQALPVPPVTVRPSIILETGIRSEDDLTH
KMVDIIRVNQRLKESKEAGTPPLIVQDLVDLLQYHSTTYFDNEVSGIPQAHHRSGRPLKT
LTQRLKGKEGRFRGSLSGKRVDFSSRTVISPDPNLDLSEVGVPEQVAMKLTIPEIVTEWN
IERMRKLVINGPEKFPGVNYIVRPDGVKIRLDFVEDRSTIAETLEIGYLIERHLADGDIV
MFNRQPSLHQMSIMAHYVRVLPGKTFRLHPSVCPPYNADFDGDEMNLHVPQSEEARAEAI
LLMRVQDQLISPRYGGPIIGALRDFVTGAYLLTKDGTTLSVQEFSNLAMLGGYKDALPKP
GTKTKDGPAYTGKQLFSLFLPKDFNYVLTSKWSKGTSGPAKDVVIKKGELISGVIDKTSI
GAEEPESVLHRITKDYGNAVGKNFLNSILIMVKQFITSYGFSYGFGDLEVPEKEKQQILD
DIQATYDVVSDLTHQYEKGTLKLTRGMRAEEALEAYIVNELGKARDKAGSTANNSLDDTN
AGKIMATTGARGSSLNVGQMAGALGQQSRRGNRMNDGYHNRALTHFQEHDNNPDAHGFVK
SNYREGLSALEFFFHAMGGREGLVDTAVRTQQSGYMQRRLINALEHIRLEYDGTVRDPHG
HIVQFLYGEDGIDVAKSDHGEAFNASRLAESQTMIDSGKKATKDEIDSAIKKYTKTFSPR
LTSLVSEALHESSLSKDGVEAVCKKGLSLYNKAKVEPGQAVGIITAQSIGEPGTQMTLRT
FHFAGIKERNVTLGLPRLIELVDARKKPVTPTMDIYLDNESKKSREKAIEVARNVLQTKI
SALIATSETDYSTEIKLILSENRLKERGCSIAEVEASLASNKKFKMETVGELITLKLVEE
SDTATVIAIRNKVLNTTVKGVPDVERVTLVQKDDEWVIQTTGSNIAKVLEVKGIDKTNVR
TNNVFEIAGTLGIEAARNALIDELNHTLGDQGLEVDNRYIMLVSDLMCSRGYMQQIGRHG
IAGTKDSVLARAAFEITVPTIAHAALGGEVEQLKGITENVIVGSNIPIGSGTVDLYMQVS
KKK
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgtcccttcaagctatcaaatcaattgacggaattcgtttttctgtatggtctccaact
gaagttagaaaatactctgttgcagaaatcactgctcctgaaacatatgatgaagatgga
atgccagttcaaggcggtcttatggatggacgacttggaactcttgaacctggacaaaaa
tgtctaacatgtggaaatacagcagccagatgtcctggacactttggacatattgaactt
gcagaaccaattttacatattgcattcattgataatatttacaaactattacaatcaaca
tgtcgctcatgtgcaagactcaaagtcccacaagaagatttgaatgaattcaaaaaaatc
aaagacaaacatgctgcatatactgtaatttctcaaaaacgtattccagaacaaattata
gaaaaagcaaagaaagcaaaagaatgtccacattgtggaaagacacagtatgagctagta
tttacaaaaccaactatcttcgttgagaaaacagagattggtgaacatagattacttcca
attacaattagagaaagattctcacaaattcttgatgaagacttgcaattgctatcatat
gatcctgtcactgctcgacctgagtggtttattcttcaagcattaccagtaccaccagta
actgtaagaccatcaattattcttgagacaggaattagatctgaggatgatttgacacac
aaaatggtagatatcatcagagttaatcaaagactaaaagaaagtaaagaggcaggaaca
ccgccactcattgtacaagacctagttgacctgttacaatatcactctacaacatatttt
gataatgaagtttctggaattccacaagctcatcatcgttctggacgtccacttaaaaca
ttaactcaaagactaaaaggaaaagaaggacgattcagaggttcactctctggaaagagg
gttgacttttcaagtagaactgtaatttcccctgatcctaacttggatttgtctgaagtt
ggagttcctgaacaagtagccatgaaactaacaatccctgaaattgttacagaatggaat
attgagagaatgcgaaaactcgtaattaacggacctgaaaaattcccaggtgtcaactat
atcgttagacctgatggtgtaaagattagattggattttgtagaagaccgttctactatt
gcagaaacccttgagattggttatctaattgaaagacatcttgcagacggtgatattgtc
atgtttaacagacaaccttcacttcaccagatgtcaattatggctcactatgtgagagta
ctccctggtaaaactttcagattgcatccttcagtgtgtcctccatacaacgcagatttt
gatggtgatgagatgaaccttcacgttcctcaaagtgaggaggccagagcagaagcaatt
cttttgatgagagttcaagatcaattaatctctcctagatatggtggtccaatcattggc
gcactaagagactttgttactggtgcatatcttctaacaaaagacggaacaactctttct
gttcaagaattctcaaaccttgcaatgcttggcggttacaaagacgcacttccaaagccc
ggtactaaaactaaagatggtccagcctacactggaaaacaactattttcactattcctt
ccaaaagacttcaactatgtccttacatcaaaatggtcaaagggtacaagcggtcctgca
aaagatgttgtaattaaaaaaggtgaactcatcagtggtgtgattgacaaaacatcaatt
ggtgcagaagaaccagaaagtgtcttacaccgaattacaaaagactatggaaatgcagtt
ggaaagaatttcttaaactctattctaattatggtaaaacaattcatcacaagttatggt
ttcagttatggctttggtgatcttgaagtaccagaaaaagaaaaacaacagattctagat
gatattcaagcaacttatgatgttgtatctgatttaactcatcaatatgaaaaaggaacc
ctgaaacttacaagaggaatgagagctgaagaggcacttgaagcatacattgtaaatgaa
ttgggtaaagcaagagacaaagccggctctactgcaaataattcccttgatgacactaat
gctggaaaaattatggctacaacaggtgctagaggttcatctcttaacgtaggtcagatg
gcaggtgcattaggacaacagtcaagaagaggaaatagaatgaatgatggttatcataat
cgtgcattgacccatttccaagaacatgataataatcccgatgcacacggatttgtaaaa
tccaattatagagaaggtctttctgcattagaattcttcttccacgcaatgggtggacgt
gaaggacttgtagatactgcagttagaacccaacaaagtggttacatgcagcgtagattg
atcaacgcattagaacacattagattagaatatgatggaacagtaagagatccacacggt
cacattgtacaattcctttacggtgaagatggaattgatgttgcaaaaagtgatcatggt
gaagcatttaacgctagtagactagctgaatctcaaaccatgattgattctggtaaaaaa
gcaacaaaagatgaaattgattctgccattaaaaaatacacaaagacattcagtccaaga
ctaacctctcttgtttctgaagccttgcatgagtcttctttaagtaaagatggtgtggaa
gcagtttgtaagaaaggattatcactgtacaacaaagccaaagtggagccaggacaagca
gtcggaattattactgcacaatcaattggtgaacctggaactcagatgactttgagaaca
ttccactttgcaggaattaaagaaagaaacgtaactttgggtcttccaagattaattgaa
ttagttgacgcaagaaagaaacctgtaactccaactatggatatctatcttgataacgaa
tcaaagaaatctcgagaaaaagcaattgaagttgcaagaaatgtattacaaactaaaatc
agtgcgttaattgcaaccagtgaaactgactattctactgaaatcaaattaatcttaagt
gaaaataggctcaaagaaaggggttgctcaattgctgaggttgaagcatcacttgcatcc
aacaagaaattcaaaatggagacagttggtgaactgattactctcaaactagttgaagag
tctgacactgctactgtaattgcaattagaaataaagttctaaacactaccgtaaaggga
gttcctgacgttgaacgtgtaacactggttcaaaaagatgatgaatgggtaattcaaaca
actggttcaaacattgccaaagttcttgaagtaaagggcattgacaaaacaaatgtcaga
acaaacaatgtctttgaaattgcaggaactctgggtattgaggctgcaagaaacgcattg
attgatgaactcaatcacacactaggcgaccaaggattggaggtagataatagatacatt
atgttagtatctgatttgatgtgctcaagaggatacatgcaacaaatcggtagacacgga
attgcaggtaccaaagacagtgtccttgcaagagccgcatttgaaattacagttccaacc
attgcacatgctgcacttggcggggaagtggaacaactcaagggtatcactgaaaatgta
attgtcggtagtaacattccaatcggaagtggaactgttgacttgtacatgcaagtaagt
aaaaagaaataa
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